Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
USB1Q9BQ65 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
USB1Q9BQ65 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
USB1Q9BQ65 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
USB1Q9BQ65 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USB1Q9BQ65 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USB1Q9BQ65 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USB1Q9BQ65 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USB1Q9BQ65 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USB1Q9BQ65 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USB1Q9BQ65 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
USB1Q9BQ65 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
USB1Q9BQ65 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USB1Q9BQ65 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USB1Q9BQ65 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USB1Q9BQ65 STK33P1-201ENST00000423835 1218 ntBASIC17.75■□□□□ 0.43
USB1Q9BQ65 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.75■□□□□ 0.43
USB1Q9BQ65 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.75■□□□□ 0.43
USB1Q9BQ65 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.75■□□□□ 0.43
USB1Q9BQ65 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USB1Q9BQ65 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USB1Q9BQ65 AC121338.2-201ENST00000622535 1744 ntBASIC17.75■□□□□ 0.43
USB1Q9BQ65 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USB1Q9BQ65 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
USB1Q9BQ65 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
USB1Q9BQ65 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.75■□□□□ 0.43
USB1Q9BQ65 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
USB1Q9BQ65 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.74■□□□□ 0.43
USB1Q9BQ65 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
USB1Q9BQ65 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.74■□□□□ 0.43
USB1Q9BQ65 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.74■□□□□ 0.43
USB1Q9BQ65 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USB1Q9BQ65 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USB1Q9BQ65 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USB1Q9BQ65 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USB1Q9BQ65 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USB1Q9BQ65 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USB1Q9BQ65 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USB1Q9BQ65 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USB1Q9BQ65 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.74■□□□□ 0.43
USB1Q9BQ65 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USB1Q9BQ65 AC006058.3-201ENST00000606217 1069 ntBASIC17.74■□□□□ 0.43
USB1Q9BQ65 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USB1Q9BQ65 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USB1Q9BQ65 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USB1Q9BQ65 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
USB1Q9BQ65 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.74■□□□□ 0.43
USB1Q9BQ65 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.74■□□□□ 0.43
USB1Q9BQ65 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USB1Q9BQ65 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USB1Q9BQ65 FEM1AP4-201ENST00000443167 1987 ntBASIC17.73■□□□□ 0.43
USB1Q9BQ65 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
USB1Q9BQ65 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
USB1Q9BQ65 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
USB1Q9BQ65 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USB1Q9BQ65 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
USB1Q9BQ65 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.73■□□□□ 0.43
USB1Q9BQ65 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USB1Q9BQ65 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
USB1Q9BQ65 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
USB1Q9BQ65 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.73■□□□□ 0.43
USB1Q9BQ65 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
USB1Q9BQ65 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.73■□□□□ 0.43
USB1Q9BQ65 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
USB1Q9BQ65 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USB1Q9BQ65 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.73■□□□□ 0.43
USB1Q9BQ65 AC128676.1-201ENST00000454392 318 ntBASIC17.73■□□□□ 0.43
USB1Q9BQ65 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.73■□□□□ 0.43
USB1Q9BQ65 MIR2861-201ENST00000636310 90 ntBASIC17.73■□□□□ 0.43
USB1Q9BQ65 AP006294.2-201ENST00000641667 209 ntBASIC17.73■□□□□ 0.43
USB1Q9BQ65 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USB1Q9BQ65 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USB1Q9BQ65 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
USB1Q9BQ65 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
USB1Q9BQ65 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USB1Q9BQ65 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USB1Q9BQ65 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
USB1Q9BQ65 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USB1Q9BQ65 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
USB1Q9BQ65 KRT8P36-201ENST00000489121 1440 ntBASIC17.72■□□□□ 0.43
USB1Q9BQ65 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USB1Q9BQ65 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.72■□□□□ 0.43
USB1Q9BQ65 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
USB1Q9BQ65 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USB1Q9BQ65 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USB1Q9BQ65 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.72■□□□□ 0.43
USB1Q9BQ65 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USB1Q9BQ65 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USB1Q9BQ65 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
USB1Q9BQ65 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.72■□□□□ 0.43
USB1Q9BQ65 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
USB1Q9BQ65 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
USB1Q9BQ65 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
USB1Q9BQ65 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USB1Q9BQ65 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
USB1Q9BQ65 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USB1Q9BQ65 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.72■□□□□ 0.43
USB1Q9BQ65 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USB1Q9BQ65 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USB1Q9BQ65 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms