Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LITAFQ99732 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
LITAFQ99732 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC13.3□□□□□ -0.28
LITAFQ99732 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC13.3□□□□□ -0.28
LITAFQ99732 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC13.3□□□□□ -0.28
LITAFQ99732 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC13.3□□□□□ -0.28
LITAFQ99732 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC13.3□□□□□ -0.28
LITAFQ99732 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC13.3□□□□□ -0.28
LITAFQ99732 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 RARRES2P11-201ENST00000635158 484 ntBASIC13.3□□□□□ -0.28
LITAFQ99732 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LITAFQ99732 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LITAFQ99732 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
LITAFQ99732 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.3□□□□□ -0.28
LITAFQ99732 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.3□□□□□ -0.28
LITAFQ99732 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LITAFQ99732 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LITAFQ99732 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LITAFQ99732 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.29□□□□□ -0.28
LITAFQ99732 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.29□□□□□ -0.28
LITAFQ99732 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LITAFQ99732 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.29□□□□□ -0.28
LITAFQ99732 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.29□□□□□ -0.28
LITAFQ99732 TSPY9P-201ENST00000440215 945 ntBASIC13.29□□□□□ -0.28
LITAFQ99732 TSPY11P-201ENST00000442607 1045 ntBASIC13.29□□□□□ -0.28
LITAFQ99732 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.29□□□□□ -0.28
LITAFQ99732 EEF1DP3-203ENST00000566025 782 ntBASIC13.29□□□□□ -0.28
LITAFQ99732 AC090164.3-201ENST00000610780 2143 ntBASIC13.29□□□□□ -0.28
LITAFQ99732 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC13.29□□□□□ -0.28
LITAFQ99732 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.29□□□□□ -0.28
LITAFQ99732 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC13.29□□□□□ -0.28
LITAFQ99732 KRT8P36-201ENST00000489121 1440 ntBASIC13.29□□□□□ -0.28
LITAFQ99732 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LITAFQ99732 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.28□□□□□ -0.28
LITAFQ99732 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LITAFQ99732 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 AC005224.4-201ENST00000583262 1652 ntBASIC13.28□□□□□ -0.28
LITAFQ99732 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.28□□□□□ -0.28
LITAFQ99732 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.28□□□□□ -0.28
LITAFQ99732 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.28□□□□□ -0.28
LITAFQ99732 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LITAFQ99732 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 AL354751.1-201ENST00000412768 1863 ntBASIC13.28□□□□□ -0.28
LITAFQ99732 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.28□□□□□ -0.28
LITAFQ99732 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 HES6-206ENST00000409574 738 ntTSL 2 BASIC13.28□□□□□ -0.28
LITAFQ99732 AC053503.5-201ENST00000601508 636 ntBASIC13.28□□□□□ -0.28
LITAFQ99732 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 BICD1-207ENST00000551848 1962 ntBASIC13.28□□□□□ -0.28
LITAFQ99732 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.28□□□□□ -0.28
LITAFQ99732 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LITAFQ99732 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LITAFQ99732 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
LITAFQ99732 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.28□□□□□ -0.28
LITAFQ99732 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms