Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 AL355001.2-201ENST00000620617 1191 ntBASIC16.17■□□□□ 0.18
RAB40CQ96S21 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB40CQ96S21 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40CQ96S21 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB40CQ96S21 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40CQ96S21 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40CQ96S21 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.16■□□□□ 0.18
RAB40CQ96S21 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RAB40CQ96S21 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB40CQ96S21 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40CQ96S21 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.16■□□□□ 0.18
RAB40CQ96S21 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB40CQ96S21 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB40CQ96S21 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40CQ96S21 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RAB40CQ96S21 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAB40CQ96S21 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40CQ96S21 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB40CQ96S21 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40CQ96S21 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAB40CQ96S21 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAB40CQ96S21 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40CQ96S21 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAB40CQ96S21 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40CQ96S21 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40CQ96S21 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RAB40CQ96S21 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAB40CQ96S21 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.15■□□□□ 0.18
RAB40CQ96S21 MIR572-201ENST00000384983 95 ntBASIC16.15■□□□□ 0.18
RAB40CQ96S21 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40CQ96S21 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB40CQ96S21 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAB40CQ96S21 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB40CQ96S21 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40CQ96S21 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40CQ96S21 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40CQ96S21 AC093503.3-201ENST00000624917 2352 ntBASIC16.15■□□□□ 0.18
RAB40CQ96S21 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40CQ96S21 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.15■□□□□ 0.18
RAB40CQ96S21 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB40CQ96S21 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAB40CQ96S21 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB40CQ96S21 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RAB40CQ96S21 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40CQ96S21 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB40CQ96S21 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RAB40CQ96S21 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.14■□□□□ 0.17
RAB40CQ96S21 AC099791.1-201ENST00000416440 715 ntBASIC16.14■□□□□ 0.17
RAB40CQ96S21 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.14■□□□□ 0.17
RAB40CQ96S21 AC027682.1-201ENST00000562846 899 ntBASIC16.14■□□□□ 0.17
RAB40CQ96S21 AC138907.5-202ENST00000569484 235 ntBASIC16.14■□□□□ 0.17
RAB40CQ96S21 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40CQ96S21 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB40CQ96S21 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40CQ96S21 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms