Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC138Q96M89 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC138Q96M89 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC138Q96M89 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC138Q96M89 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC138Q96M89 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC138Q96M89 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC138Q96M89 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC138Q96M89 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC138Q96M89 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC138Q96M89 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
CCDC138Q96M89 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 HCG11-201ENST00000411553 5696 ntBASIC19.69■□□□□ 0.74
CCDC138Q96M89 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC138Q96M89 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC138Q96M89 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC138Q96M89 AL121832.2-201ENST00000610979 668 ntBASIC19.69■□□□□ 0.74
CCDC138Q96M89 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC138Q96M89 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 MKRN4P-201ENST00000444706 1521 ntBASIC19.69■□□□□ 0.74
CCDC138Q96M89 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC138Q96M89 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC138Q96M89 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 AL162377.1-201ENST00000618844 1793 ntBASIC19.69■□□□□ 0.74
CCDC138Q96M89 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC138Q96M89 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC138Q96M89 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC138Q96M89 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC138Q96M89 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC138Q96M89 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC138Q96M89 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC138Q96M89 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC138Q96M89 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC138Q96M89 AL512408.1-201ENST00000569378 2000 ntBASIC19.68■□□□□ 0.74
CCDC138Q96M89 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC138Q96M89 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC138Q96M89 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC138Q96M89 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC138Q96M89 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC138Q96M89 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC138Q96M89 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.68■□□□□ 0.74
CCDC138Q96M89 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.68■□□□□ 0.74
CCDC138Q96M89 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC138Q96M89 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.68■□□□□ 0.74
CCDC138Q96M89 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC138Q96M89 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC138Q96M89 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC138Q96M89 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC138Q96M89 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC138Q96M89 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC138Q96M89 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC138Q96M89 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC138Q96M89 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC138Q96M89 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC138Q96M89 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC138Q96M89 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC138Q96M89 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC138Q96M89 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC138Q96M89 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC138Q96M89 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC138Q96M89 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC138Q96M89 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC138Q96M89 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC138Q96M89 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC138Q96M89 AC083906.2-201ENST00000511578 360 ntBASIC19.67■□□□□ 0.74
CCDC138Q96M89 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC138Q96M89 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC138Q96M89 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC138Q96M89 DPP3P2-201ENST00000416030 1696 ntBASIC19.67■□□□□ 0.74
CCDC138Q96M89 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC138Q96M89 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC138Q96M89 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC138Q96M89 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC138Q96M89 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC138Q96M89 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC138Q96M89 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC138Q96M89 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC138Q96M89 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC138Q96M89 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
CCDC138Q96M89 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC138Q96M89 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CCDC138Q96M89 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms