Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00479Q96M42 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.24■□□□□ 0.03
LINC00479Q96M42 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00479Q96M42 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00479Q96M42 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00479Q96M42 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LINC00479Q96M42 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00479Q96M42 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
LINC00479Q96M42 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 AL136116.3-201ENST00000402907 1138 ntBASIC15.23■□□□□ 0.03
LINC00479Q96M42 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00479Q96M42 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LINC00479Q96M42 AL136162.1-201ENST00000607711 1078 ntBASIC15.23■□□□□ 0.03
LINC00479Q96M42 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LINC00479Q96M42 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 KRT8P36-201ENST00000489121 1440 ntBASIC15.23■□□□□ 0.03
LINC00479Q96M42 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00479Q96M42 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LINC00479Q96M42 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.23■□□□□ 0.03
LINC00479Q96M42 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00479Q96M42 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00479Q96M42 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00479Q96M42 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00479Q96M42 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00479Q96M42 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00479Q96M42 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00479Q96M42 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LINC00479Q96M42 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00479Q96M42 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC00479Q96M42 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LINC00479Q96M42 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00479Q96M42 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00479Q96M42 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LINC00479Q96M42 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00479Q96M42 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00479Q96M42 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00479Q96M42 KRT16P2-201ENST00000414673 1423 ntBASIC15.21■□□□□ 0.03
LINC00479Q96M42 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00479Q96M42 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LINC00479Q96M42 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00479Q96M42 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00479Q96M42 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC00479Q96M42 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00479Q96M42 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC00479Q96M42 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LINC00479Q96M42 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.21■□□□□ 0.02
LINC00479Q96M42 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.21■□□□□ 0.02
LINC00479Q96M42 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.21■□□□□ 0.02
LINC00479Q96M42 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
LINC00479Q96M42 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00479Q96M42 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00479Q96M42 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
LINC00479Q96M42 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00479Q96M42 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.2■□□□□ 0.02
LINC00479Q96M42 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LINC00479Q96M42 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00479Q96M42 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00479Q96M42 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00479Q96M42 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00479Q96M42 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00479Q96M42 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00479Q96M42 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
LINC00479Q96M42 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms