Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.6■■□□□ 1.05
SNX27Q96L92 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNX27Q96L92 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.6■■□□□ 1.05
SNX27Q96L92 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.6■■□□□ 1.05
SNX27Q96L92 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.6■■□□□ 1.05
SNX27Q96L92 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.6■■□□□ 1.05
SNX27Q96L92 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.6■■□□□ 1.05
SNX27Q96L92 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.6■■□□□ 1.05
SNX27Q96L92 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SNX27Q96L92 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.6■■□□□ 1.05
SNX27Q96L92 AL121906.2-201ENST00000621597 723 ntBASIC21.6■■□□□ 1.05
SNX27Q96L92 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SNX27Q96L92 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.6■■□□□ 1.05
SNX27Q96L92 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.6■■□□□ 1.05
SNX27Q96L92 SMG8-203ENST00000578922 2178 ntBASIC21.6■■□□□ 1.05
SNX27Q96L92 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SNX27Q96L92 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNX27Q96L92 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
SNX27Q96L92 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNX27Q96L92 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNX27Q96L92 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.59■■□□□ 1.05
SNX27Q96L92 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNX27Q96L92 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
SNX27Q96L92 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SNX27Q96L92 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.59■■□□□ 1.05
SNX27Q96L92 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SNX27Q96L92 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.59■■□□□ 1.05
SNX27Q96L92 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SNX27Q96L92 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SNX27Q96L92 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNX27Q96L92 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.58■■□□□ 1.05
SNX27Q96L92 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SNX27Q96L92 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNX27Q96L92 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNX27Q96L92 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNX27Q96L92 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNX27Q96L92 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNX27Q96L92 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SNX27Q96L92 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.58■■□□□ 1.05
SNX27Q96L92 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
SNX27Q96L92 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.58■■□□□ 1.05
SNX27Q96L92 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.58■■□□□ 1.05
SNX27Q96L92 PRKY-204ENST00000533551 1019 ntBASIC21.58■■□□□ 1.05
SNX27Q96L92 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.58■■□□□ 1.05
SNX27Q96L92 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.58■■□□□ 1.05
SNX27Q96L92 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SNX27Q96L92 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SNX27Q96L92 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.58■■□□□ 1.04
SNX27Q96L92 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
SNX27Q96L92 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNX27Q96L92 AC020907.5-201ENST00000624372 1936 ntBASIC21.57■■□□□ 1.04
SNX27Q96L92 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.57■■□□□ 1.04
SNX27Q96L92 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNX27Q96L92 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNX27Q96L92 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SNX27Q96L92 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNX27Q96L92 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.57■■□□□ 1.04
SNX27Q96L92 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.57■■□□□ 1.04
SNX27Q96L92 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.57■■□□□ 1.04
SNX27Q96L92 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.57■■□□□ 1.04
SNX27Q96L92 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.57■■□□□ 1.04
SNX27Q96L92 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNX27Q96L92 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SNX27Q96L92 AC073314.1-201ENST00000568729 2216 ntBASIC21.56■■□□□ 1.04
SNX27Q96L92 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNX27Q96L92 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNX27Q96L92 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SNX27Q96L92 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.56■■□□□ 1.04
SNX27Q96L92 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.56■■□□□ 1.04
SNX27Q96L92 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.56■■□□□ 1.04
SNX27Q96L92 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.56■■□□□ 1.04
SNX27Q96L92 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNX27Q96L92 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.56■■□□□ 1.04
SNX27Q96L92 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.56■■□□□ 1.04
SNX27Q96L92 AC110285.5-201ENST00000611501 352 ntBASIC21.56■■□□□ 1.04
SNX27Q96L92 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.56■■□□□ 1.04
SNX27Q96L92 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNX27Q96L92 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNX27Q96L92 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SNX27Q96L92 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.56■■□□□ 1.04
SNX27Q96L92 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNX27Q96L92 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNX27Q96L92 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNX27Q96L92 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.55■■□□□ 1.04
SNX27Q96L92 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNX27Q96L92 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.55■■□□□ 1.04
SNX27Q96L92 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNX27Q96L92 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNX27Q96L92 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNX27Q96L92 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNX27Q96L92 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNX27Q96L92 MIR718-201ENST00000390190 70 ntBASIC21.55■■□□□ 1.04
SNX27Q96L92 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNX27Q96L92 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.55■■□□□ 1.04
SNX27Q96L92 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.55■■□□□ 1.04
SNX27Q96L92 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.55■■□□□ 1.04
SNX27Q96L92 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNX27Q96L92 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNX27Q96L92 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNX27Q96L92 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms