Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.11■□□□□ 0.97
CALR3Q96L12 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CALR3Q96L12 PTBP1P-201ENST00000554374 1601 ntBASIC21.11■□□□□ 0.97
CALR3Q96L12 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.11■□□□□ 0.97
CALR3Q96L12 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.1■□□□□ 0.97
CALR3Q96L12 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CALR3Q96L12 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CALR3Q96L12 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
CALR3Q96L12 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CALR3Q96L12 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CALR3Q96L12 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CALR3Q96L12 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CALR3Q96L12 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CALR3Q96L12 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CALR3Q96L12 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CALR3Q96L12 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CALR3Q96L12 MCRIP2P1-201ENST00000394346 511 ntBASIC21.1■□□□□ 0.97
CALR3Q96L12 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.1■□□□□ 0.97
CALR3Q96L12 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.1■□□□□ 0.97
CALR3Q96L12 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.1■□□□□ 0.97
CALR3Q96L12 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.1■□□□□ 0.97
CALR3Q96L12 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.09■□□□□ 0.97
CALR3Q96L12 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CALR3Q96L12 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CALR3Q96L12 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.09■□□□□ 0.97
CALR3Q96L12 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CALR3Q96L12 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CALR3Q96L12 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CALR3Q96L12 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CALR3Q96L12 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.09■□□□□ 0.97
CALR3Q96L12 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CALR3Q96L12 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CALR3Q96L12 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.09■□□□□ 0.97
CALR3Q96L12 AL031963.3-201ENST00000606441 850 ntBASIC21.09■□□□□ 0.97
CALR3Q96L12 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CALR3Q96L12 KRT8P20-201ENST00000423953 1409 ntBASIC21.09■□□□□ 0.97
CALR3Q96L12 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.09■□□□□ 0.97
CALR3Q96L12 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.09■□□□□ 0.97
CALR3Q96L12 AP001271.2-201ENST00000624018 1556 ntBASIC21.09■□□□□ 0.97
CALR3Q96L12 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CALR3Q96L12 AC005332.7-201ENST00000614046 2005 ntBASIC21.09■□□□□ 0.97
CALR3Q96L12 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CALR3Q96L12 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CALR3Q96L12 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.08■□□□□ 0.97
CALR3Q96L12 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CALR3Q96L12 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CALR3Q96L12 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CALR3Q96L12 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CALR3Q96L12 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.08■□□□□ 0.96
CALR3Q96L12 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.08■□□□□ 0.96
CALR3Q96L12 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CALR3Q96L12 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.08■□□□□ 0.96
CALR3Q96L12 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CALR3Q96L12 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CALR3Q96L12 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CALR3Q96L12 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.07■□□□□ 0.96
CALR3Q96L12 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CALR3Q96L12 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CALR3Q96L12 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CALR3Q96L12 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.07■□□□□ 0.96
CALR3Q96L12 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CALR3Q96L12 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CALR3Q96L12 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CALR3Q96L12 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.07■□□□□ 0.96
CALR3Q96L12 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CALR3Q96L12 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALR3Q96L12 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALR3Q96L12 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CALR3Q96L12 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.06■□□□□ 0.96
CALR3Q96L12 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALR3Q96L12 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALR3Q96L12 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CALR3Q96L12 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALR3Q96L12 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.06■□□□□ 0.96
CALR3Q96L12 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.06■□□□□ 0.96
CALR3Q96L12 NTF6G-201ENST00000591094 616 ntBASIC21.06■□□□□ 0.96
CALR3Q96L12 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CALR3Q96L12 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.06■□□□□ 0.96
CALR3Q96L12 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CALR3Q96L12 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.06■□□□□ 0.96
CALR3Q96L12 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.06■□□□□ 0.96
CALR3Q96L12 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALR3Q96L12 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CALR3Q96L12 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CALR3Q96L12 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.06■□□□□ 0.96
CALR3Q96L12 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.05■□□□□ 0.96
CALR3Q96L12 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CALR3Q96L12 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CALR3Q96L12 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.05■□□□□ 0.96
CALR3Q96L12 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALR3Q96L12 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALR3Q96L12 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALR3Q96L12 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALR3Q96L12 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CALR3Q96L12 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
CALR3Q96L12 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CALR3Q96L12 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALR3Q96L12 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CALR3Q96L12 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.05■□□□□ 0.96
CALR3Q96L12 AC034268.1-201ENST00000441047 882 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms