Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS50Q96JG6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VPS50Q96JG6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS50Q96JG6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
VPS50Q96JG6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VPS50Q96JG6 AIRN-201ENST00000601203 4374 ntBASIC19.46■□□□□ 0.71
VPS50Q96JG6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS50Q96JG6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS50Q96JG6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS50Q96JG6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS50Q96JG6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
VPS50Q96JG6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.46■□□□□ 0.71
VPS50Q96JG6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS50Q96JG6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS50Q96JG6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS50Q96JG6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS50Q96JG6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.46■□□□□ 0.71
VPS50Q96JG6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VPS50Q96JG6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VPS50Q96JG6 FAM21FP-204ENST00000608637 956 ntBASIC19.46■□□□□ 0.71
VPS50Q96JG6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
VPS50Q96JG6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS50Q96JG6 AC007225.1-201ENST00000566331 1836 ntBASIC19.46■□□□□ 0.71
VPS50Q96JG6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VPS50Q96JG6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.46■□□□□ 0.71
VPS50Q96JG6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.46■□□□□ 0.71
VPS50Q96JG6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.45■□□□□ 0.7
VPS50Q96JG6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS50Q96JG6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VPS50Q96JG6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS50Q96JG6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 BX276092.2-201ENST00000417668 665 ntBASIC19.45■□□□□ 0.7
VPS50Q96JG6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
VPS50Q96JG6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.45■□□□□ 0.7
VPS50Q96JG6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.45■□□□□ 0.7
VPS50Q96JG6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.45■□□□□ 0.7
VPS50Q96JG6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.45■□□□□ 0.7
VPS50Q96JG6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS50Q96JG6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS50Q96JG6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.45■□□□□ 0.7
VPS50Q96JG6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS50Q96JG6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS50Q96JG6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS50Q96JG6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VPS50Q96JG6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS50Q96JG6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS50Q96JG6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS50Q96JG6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS50Q96JG6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS50Q96JG6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
VPS50Q96JG6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS50Q96JG6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS50Q96JG6 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.44■□□□□ 0.7
VPS50Q96JG6 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.44■□□□□ 0.7
VPS50Q96JG6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS50Q96JG6 AC097658.1-201ENST00000475555 843 ntBASIC19.44■□□□□ 0.7
VPS50Q96JG6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS50Q96JG6 AC100791.3-201ENST00000617619 330 ntBASIC19.44■□□□□ 0.7
VPS50Q96JG6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VPS50Q96JG6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
VPS50Q96JG6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS50Q96JG6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS50Q96JG6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS50Q96JG6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
VPS50Q96JG6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.44■□□□□ 0.7
VPS50Q96JG6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS50Q96JG6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS50Q96JG6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS50Q96JG6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS50Q96JG6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS50Q96JG6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS50Q96JG6 AC026471.1-201ENST00000564629 3026 ntBASIC19.43■□□□□ 0.7
VPS50Q96JG6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.43■□□□□ 0.7
VPS50Q96JG6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.43■□□□□ 0.7
VPS50Q96JG6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.43■□□□□ 0.7
VPS50Q96JG6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.43■□□□□ 0.7
VPS50Q96JG6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS50Q96JG6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.43■□□□□ 0.7
VPS50Q96JG6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS50Q96JG6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS50Q96JG6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.43■□□□□ 0.7
VPS50Q96JG6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.43■□□□□ 0.7
VPS50Q96JG6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS50Q96JG6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VPS50Q96JG6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.43■□□□□ 0.7
VPS50Q96JG6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms