Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SHDQ96IW2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SHDQ96IW2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHDQ96IW2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHDQ96IW2 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.26■□□□□ 0.83
SHDQ96IW2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.26■□□□□ 0.83
SHDQ96IW2 MESTP1-201ENST00000404287 994 ntBASIC20.26■□□□□ 0.83
SHDQ96IW2 CRYGFP-201ENST00000418459 633 ntBASIC20.26■□□□□ 0.83
SHDQ96IW2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SHDQ96IW2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.26■□□□□ 0.83
SHDQ96IW2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SHDQ96IW2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
SHDQ96IW2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.26■□□□□ 0.83
SHDQ96IW2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SHDQ96IW2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHDQ96IW2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.25■□□□□ 0.83
SHDQ96IW2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHDQ96IW2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SHDQ96IW2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.25■□□□□ 0.83
SHDQ96IW2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.25■□□□□ 0.83
SHDQ96IW2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHDQ96IW2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.25■□□□□ 0.83
SHDQ96IW2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHDQ96IW2 B3GAT3P1-201ENST00000471720 806 ntBASIC20.25■□□□□ 0.83
SHDQ96IW2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHDQ96IW2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.25■□□□□ 0.83
SHDQ96IW2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.25■□□□□ 0.83
SHDQ96IW2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.25■□□□□ 0.83
SHDQ96IW2 AC131212.4-201ENST00000623606 975 ntBASIC20.25■□□□□ 0.83
SHDQ96IW2 AL358472.4-201ENST00000633140 710 ntBASIC20.25■□□□□ 0.83
SHDQ96IW2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.25■□□□□ 0.83
SHDQ96IW2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHDQ96IW2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHDQ96IW2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SHDQ96IW2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SHDQ96IW2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.24■□□□□ 0.83
SHDQ96IW2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.24■□□□□ 0.83
SHDQ96IW2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SHDQ96IW2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.24■□□□□ 0.83
SHDQ96IW2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.24■□□□□ 0.83
SHDQ96IW2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.24■□□□□ 0.83
SHDQ96IW2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SHDQ96IW2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.24■□□□□ 0.83
SHDQ96IW2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHDQ96IW2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SHDQ96IW2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHDQ96IW2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHDQ96IW2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.23■□□□□ 0.83
SHDQ96IW2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHDQ96IW2 HMGA1P5-201ENST00000412453 271 ntBASIC20.23■□□□□ 0.83
SHDQ96IW2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.23■□□□□ 0.83
SHDQ96IW2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SHDQ96IW2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.23■□□□□ 0.83
SHDQ96IW2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.23■□□□□ 0.83
SHDQ96IW2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SHDQ96IW2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHDQ96IW2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.23■□□□□ 0.83
SHDQ96IW2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SHDQ96IW2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.23■□□□□ 0.83
SHDQ96IW2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHDQ96IW2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHDQ96IW2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHDQ96IW2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHDQ96IW2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHDQ96IW2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHDQ96IW2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.22■□□□□ 0.83
SHDQ96IW2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.22■□□□□ 0.83
SHDQ96IW2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.22■□□□□ 0.83
SHDQ96IW2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHDQ96IW2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.22■□□□□ 0.83
SHDQ96IW2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.22■□□□□ 0.83
SHDQ96IW2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.22■□□□□ 0.83
SHDQ96IW2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.22■□□□□ 0.83
SHDQ96IW2 PTBP1P-201ENST00000554374 1601 ntBASIC20.22■□□□□ 0.83
SHDQ96IW2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SHDQ96IW2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHDQ96IW2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHDQ96IW2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
SHDQ96IW2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHDQ96IW2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
SHDQ96IW2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHDQ96IW2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHDQ96IW2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHDQ96IW2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHDQ96IW2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SHDQ96IW2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHDQ96IW2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms