Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM11Q96F44 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM11Q96F44 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM11Q96F44 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRIM11Q96F44 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM11Q96F44 C2orf69P4-201ENST00000565394 541 ntBASIC21.13■□□□□ 0.97
TRIM11Q96F44 AC133552.2-202ENST00000575694 574 ntBASIC21.13■□□□□ 0.97
TRIM11Q96F44 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.13■□□□□ 0.97
TRIM11Q96F44 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM11Q96F44 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM11Q96F44 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM11Q96F44 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
TRIM11Q96F44 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM11Q96F44 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM11Q96F44 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM11Q96F44 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM11Q96F44 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRIM11Q96F44 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM11Q96F44 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM11Q96F44 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM11Q96F44 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM11Q96F44 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM11Q96F44 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM11Q96F44 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.12■□□□□ 0.97
TRIM11Q96F44 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM11Q96F44 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM11Q96F44 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM11Q96F44 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
TRIM11Q96F44 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM11Q96F44 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM11Q96F44 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM11Q96F44 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM11Q96F44 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM11Q96F44 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TRIM11Q96F44 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRIM11Q96F44 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TRIM11Q96F44 AC009237.14-201ENST00000609975 1594 ntBASIC21.11■□□□□ 0.97
TRIM11Q96F44 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.11■□□□□ 0.97
TRIM11Q96F44 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM11Q96F44 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TRIM11Q96F44 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 AC004911.1-201ENST00000416316 871 ntBASIC21.11■□□□□ 0.97
TRIM11Q96F44 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.11■□□□□ 0.97
TRIM11Q96F44 AC093787.1-201ENST00000450396 207 ntBASIC21.11■□□□□ 0.97
TRIM11Q96F44 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM11Q96F44 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 AC023632.3-201ENST00000521633 145 ntBASIC21.11■□□□□ 0.97
TRIM11Q96F44 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.11■□□□□ 0.97
TRIM11Q96F44 AC080038.1-201ENST00000611274 1154 ntBASIC21.11■□□□□ 0.97
TRIM11Q96F44 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM11Q96F44 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM11Q96F44 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM11Q96F44 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM11Q96F44 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM11Q96F44 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM11Q96F44 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM11Q96F44 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM11Q96F44 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM11Q96F44 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM11Q96F44 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM11Q96F44 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRIM11Q96F44 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM11Q96F44 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM11Q96F44 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM11Q96F44 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM11Q96F44 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM11Q96F44 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM11Q96F44 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM11Q96F44 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
TRIM11Q96F44 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM11Q96F44 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM11Q96F44 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRIM11Q96F44 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM11Q96F44 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM11Q96F44 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TRIM11Q96F44 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM11Q96F44 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM11Q96F44 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM11Q96F44 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM11Q96F44 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.09■□□□□ 0.97
TRIM11Q96F44 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRIM11Q96F44 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM11Q96F44 AC092437.1-201ENST00000624794 1048 ntBASIC21.09■□□□□ 0.97
TRIM11Q96F44 AC073111.5-205ENST00000641717 521 ntBASIC21.09■□□□□ 0.97
TRIM11Q96F44 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM11Q96F44 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM11Q96F44 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms