Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VTI1AQ96AJ9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
VTI1AQ96AJ9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.57■■□□□ 1.2
VTI1AQ96AJ9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
VTI1AQ96AJ9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.57■■□□□ 1.2
VTI1AQ96AJ9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
VTI1AQ96AJ9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VTI1AQ96AJ9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
VTI1AQ96AJ9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.57■■□□□ 1.2
VTI1AQ96AJ9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VTI1AQ96AJ9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
VTI1AQ96AJ9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 MMP23A-201ENST00000234610 1017 ntBASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 TMPOP1-202ENST00000424642 1267 ntBASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 CD177P1-201ENST00000606252 935 ntBASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VTI1AQ96AJ9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 AF186192.3-201ENST00000583427 947 ntBASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 AC012306.2-201ENST00000609350 630 ntBASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VTI1AQ96AJ9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 FAM197Y1-201ENST00000421178 764 ntBASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 AL353708.3-201ENST00000610272 989 ntBASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 AL121829.2-201ENST00000620908 328 ntBASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.54■■□□□ 1.2
VTI1AQ96AJ9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 KRT16P5-201ENST00000455284 522 ntBASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 NBPF21P-201ENST00000425093 1451 ntBASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
VTI1AQ96AJ9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VTI1AQ96AJ9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.52■■□□□ 1.2
VTI1AQ96AJ9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VTI1AQ96AJ9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VTI1AQ96AJ9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VTI1AQ96AJ9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.52■■□□□ 1.2
VTI1AQ96AJ9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VTI1AQ96AJ9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VTI1AQ96AJ9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.52■■□□□ 1.2
VTI1AQ96AJ9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms