Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC25.68■■□□□ 1.7
SMARCC1Q92922 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SMARCC1Q92922 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMARCC1Q92922 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SMARCC1Q92922 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.68■■□□□ 1.7
SMARCC1Q92922 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMARCC1Q92922 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMARCC1Q92922 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC25.68■■□□□ 1.7
SMARCC1Q92922 ABBA01031674.1-201ENST00000635145 728 ntBASIC25.68■■□□□ 1.7
SMARCC1Q92922 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMARCC1Q92922 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC25.68■■□□□ 1.7
SMARCC1Q92922 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMARCC1Q92922 AP006587.1-201ENST00000534129 1502 ntBASIC25.68■■□□□ 1.7
SMARCC1Q92922 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SMARCC1Q92922 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
SMARCC1Q92922 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SMARCC1Q92922 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
SMARCC1Q92922 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SMARCC1Q92922 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC25.67■■□□□ 1.7
SMARCC1Q92922 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC25.67■■□□□ 1.7
SMARCC1Q92922 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
SMARCC1Q92922 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SMARCC1Q92922 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC25.67■■□□□ 1.7
SMARCC1Q92922 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
SMARCC1Q92922 KRT8P17-201ENST00000453110 1448 ntBASIC25.67■■□□□ 1.7
SMARCC1Q92922 B3GAT3P1-201ENST00000471720 806 ntBASIC25.67■■□□□ 1.7
SMARCC1Q92922 AC121338.2-201ENST00000622535 1744 ntBASIC25.67■■□□□ 1.7
SMARCC1Q92922 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SMARCC1Q92922 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SMARCC1Q92922 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SMARCC1Q92922 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
SMARCC1Q92922 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SMARCC1Q92922 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMARCC1Q92922 ECEL1P2-202ENST00000465689 757 ntBASIC25.66■■□□□ 1.7
SMARCC1Q92922 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMARCC1Q92922 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SMARCC1Q92922 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMARCC1Q92922 AC233723.2-201ENST00000623798 2106 ntBASIC25.66■■□□□ 1.7
SMARCC1Q92922 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC25.66■■□□□ 1.7
SMARCC1Q92922 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC1Q92922 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
SMARCC1Q92922 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC1Q92922 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC1Q92922 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC1Q92922 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC25.65■■□□□ 1.7
SMARCC1Q92922 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC1Q92922 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC1Q92922 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC1Q92922 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SMARCC1Q92922 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC25.65■■□□□ 1.7
SMARCC1Q92922 AC128688.1-201ENST00000487626 519 ntBASIC25.65■■□□□ 1.7
SMARCC1Q92922 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC25.65■■□□□ 1.7
SMARCC1Q92922 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
SMARCC1Q92922 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC1Q92922 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC25.65■■□□□ 1.7
SMARCC1Q92922 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC1Q92922 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC25.65■■□□□ 1.7
SMARCC1Q92922 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
SMARCC1Q92922 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC1Q92922 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC1Q92922 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.65■■□□□ 1.7
SMARCC1Q92922 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC1Q92922 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMARCC1Q92922 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SMARCC1Q92922 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SMARCC1Q92922 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SMARCC1Q92922 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.64■■□□□ 1.7
SMARCC1Q92922 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SMARCC1Q92922 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.64■■□□□ 1.7
SMARCC1Q92922 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SMARCC1Q92922 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC25.64■■□□□ 1.7
SMARCC1Q92922 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
SMARCC1Q92922 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SMARCC1Q92922 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.64■■□□□ 1.69
SMARCC1Q92922 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SMARCC1Q92922 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
SMARCC1Q92922 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC1Q92922 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.63■■□□□ 1.69
SMARCC1Q92922 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC1Q92922 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC1Q92922 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC1Q92922 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
SMARCC1Q92922 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
SMARCC1Q92922 BX664615.1-201ENST00000443558 458 ntBASIC25.63■■□□□ 1.69
SMARCC1Q92922 AC011506.1-201ENST00000474329 610 ntBASIC25.63■■□□□ 1.69
SMARCC1Q92922 AC097488.1-201ENST00000507834 756 ntBASIC25.63■■□□□ 1.69
SMARCC1Q92922 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC1Q92922 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC1Q92922 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC25.63■■□□□ 1.69
SMARCC1Q92922 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC1Q92922 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMARCC1Q92922 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.62■■□□□ 1.69
SMARCC1Q92922 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SMARCC1Q92922 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
SMARCC1Q92922 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SMARCC1Q92922 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SMARCC1Q92922 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC25.62■■□□□ 1.69
SMARCC1Q92922 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC25.62■■□□□ 1.69
SMARCC1Q92922 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMARCC1Q92922 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms