Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AC008175.2-201ENST00000612840 297 ntBASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 CROCCP3-202ENST00000420820 1947 ntBASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.07■□□□□ 0.32
SMIM4Q8WVI0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SMIM4Q8WVI0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SMIM4Q8WVI0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 AC005332.8-201ENST00000622750 2735 ntBASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 BX842568.3-201ENST00000418104 571 ntBASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMIM4Q8WVI0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMIM4Q8WVI0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms