Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DEPDC1BQ8WUY9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
DEPDC1BQ8WUY9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
DEPDC1BQ8WUY9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.14■□□□□ 0.98
DEPDC1BQ8WUY9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DEPDC1BQ8WUY9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 MTDHP1-201ENST00000605323 784 ntBASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.14■□□□□ 0.97
DEPDC1BQ8WUY9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 AC133681.1-201ENST00000465482 601 ntBASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 AC005829.2-201ENST00000571422 1056 ntBASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 AC011484.1-201ENST00000377652 1995 ntBASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.13■□□□□ 0.97
DEPDC1BQ8WUY9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 LINC01006-201ENST00000333319 2292 ntBASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 AC233702.5-201ENST00000584107 538 ntBASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 AC120498.8-201ENST00000614275 531 ntBASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.12■□□□□ 0.97
DEPDC1BQ8WUY9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 AC239809.2-201ENST00000415381 517 ntBASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 AC124016.1-201ENST00000609552 612 ntBASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1BQ8WUY9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
DEPDC1BQ8WUY9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DEPDC1BQ8WUY9 FEM1AP1-201ENST00000431297 1995 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms