Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC27.84■■■□□ 2.05
TMC1Q8TDI8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
TMC1Q8TDI8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
TMC1Q8TDI8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC27.84■■■□□ 2.05
TMC1Q8TDI8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 AC239809.2-201ENST00000415381 517 ntBASIC27.83■■■□□ 2.05
TMC1Q8TDI8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 AC023632.3-201ENST00000521633 145 ntBASIC27.83■■■□□ 2.05
TMC1Q8TDI8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
TMC1Q8TDI8 LINC01006-201ENST00000333319 2292 ntBASIC27.83■■■□□ 2.04
TMC1Q8TDI8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC27.83■■■□□ 2.04
TMC1Q8TDI8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
TMC1Q8TDI8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC27.82■■■□□ 2.04
TMC1Q8TDI8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
TMC1Q8TDI8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
TMC1Q8TDI8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC27.82■■■□□ 2.04
TMC1Q8TDI8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
TMC1Q8TDI8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC27.82■■■□□ 2.04
TMC1Q8TDI8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC27.82■■■□□ 2.04
TMC1Q8TDI8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC27.82■■■□□ 2.04
TMC1Q8TDI8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC27.82■■■□□ 2.04
TMC1Q8TDI8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
TMC1Q8TDI8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC27.81■■■□□ 2.04
TMC1Q8TDI8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
TMC1Q8TDI8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
TMC1Q8TDI8 KRASP1-201ENST00000407852 552 ntBASIC27.81■■■□□ 2.04
TMC1Q8TDI8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC27.81■■■□□ 2.04
TMC1Q8TDI8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC27.81■■■□□ 2.04
TMC1Q8TDI8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
TMC1Q8TDI8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
TMC1Q8TDI8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
TMC1Q8TDI8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
TMC1Q8TDI8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC27.8■■■□□ 2.04
TMC1Q8TDI8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
TMC1Q8TDI8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
TMC1Q8TDI8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC27.8■■■□□ 2.04
TMC1Q8TDI8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
TMC1Q8TDI8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
TMC1Q8TDI8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
TMC1Q8TDI8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
TMC1Q8TDI8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
TMC1Q8TDI8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 AC073314.1-201ENST00000568729 2216 ntBASIC27.79■■■□□ 2.04
TMC1Q8TDI8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
TMC1Q8TDI8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 MIR718-201ENST00000390190 70 ntBASIC27.78■■■□□ 2.04
TMC1Q8TDI8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 AC092667.1-201ENST00000434301 2586 ntBASIC27.78■■■□□ 2.04
TMC1Q8TDI8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TMC1Q8TDI8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC27.77■■■□□ 2.04
TMC1Q8TDI8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TMC1Q8TDI8 BID-203ENST00000399765 1879 ntTSL 2 BASIC27.77■■■□□ 2.04
TMC1Q8TDI8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
TMC1Q8TDI8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC27.77■■■□□ 2.04
TMC1Q8TDI8 AC133681.1-201ENST00000465482 601 ntBASIC27.77■■■□□ 2.04
TMC1Q8TDI8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC27.77■■■□□ 2.04
TMC1Q8TDI8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC27.77■■■□□ 2.04
TMC1Q8TDI8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC27.77■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms