Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 AL671883.3-201ENST00000603274 991 ntBASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
ALMS1Q8TCU4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 TSPY21P-201ENST00000433481 731 ntBASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 TSPY23P-201ENST00000440136 739 ntBASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 GPALPP1-207ENST00000611650 899 ntBASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 AC096733.2-201ENST00000609937 1394 ntBASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ALMS1Q8TCU4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 AC023511.2-201ENST00000618803 211 ntBASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 AC007663.1-201ENST00000438948 1240 ntBASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 AP000692.2-201ENST00000608391 879 ntBASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 HYMAI.1-201ENST00000620949 238 ntBASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 RCC2P6-201ENST00000526625 1557 ntBASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ALMS1Q8TCU4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 AC246785.2-201ENST00000432512 513 ntBASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 PTBP1P-201ENST00000554374 1601 ntBASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 AC004263.2-201ENST00000617183 678 ntBASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 AL691432.3-201ENST00000621860 400 ntBASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC13.54□□□□□ -0.24
ALMS1Q8TCU4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms