Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.88■□□□□ 0.77
RAB3IL1Q8TBN0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB3IL1Q8TBN0 AC005837.3-201ENST00000612163 286 ntBASIC19.88■□□□□ 0.77
RAB3IL1Q8TBN0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.88■□□□□ 0.77
RAB3IL1Q8TBN0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3IL1Q8TBN0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3IL1Q8TBN0 AC093484.2-201ENST00000580996 2166 ntBASIC19.88■□□□□ 0.77
RAB3IL1Q8TBN0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3IL1Q8TBN0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3IL1Q8TBN0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3IL1Q8TBN0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.88■□□□□ 0.77
RAB3IL1Q8TBN0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3IL1Q8TBN0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3IL1Q8TBN0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 PBX2P1-201ENST00000493219 1291 ntBASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RAB3IL1Q8TBN0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 Z82202.1-201ENST00000623446 1880 ntBASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3IL1Q8TBN0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
RAB3IL1Q8TBN0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.83■□□□□ 0.77
RAB3IL1Q8TBN0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB3IL1Q8TBN0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAB3IL1Q8TBN0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.83■□□□□ 0.77
RAB3IL1Q8TBN0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.83■□□□□ 0.77
RAB3IL1Q8TBN0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB3IL1Q8TBN0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAB3IL1Q8TBN0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms