Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AP001412.1-201ENST00000608405 714 ntBASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 REXO1L12P-201ENST00000622156 912 ntBASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHKBP1Q8TBC3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 AC211429.1-201ENST00000415277 523 ntBASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 BX088651.1-201ENST00000540551 451 ntBASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 AL121829.2-201ENST00000620908 328 ntBASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 KRT17P2-201ENST00000300992 1314 ntBASIC21.01■□□□□ 0.95
SHKBP1Q8TBC3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SHKBP1Q8TBC3 AL121603.2-201ENST00000557373 2117 ntBASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHKBP1Q8TBC3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 TSPY15P-201ENST00000457163 923 ntBASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHKBP1Q8TBC3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHKBP1Q8TBC3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHKBP1Q8TBC3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHKBP1Q8TBC3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.97■□□□□ 0.95
SHKBP1Q8TBC3 MIR4785-201ENST00000585005 73 ntBASIC20.97■□□□□ 0.95
SHKBP1Q8TBC3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHKBP1Q8TBC3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHKBP1Q8TBC3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHKBP1Q8TBC3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms