Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 AL355802.2-201ENST00000402069 882 ntBASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HMGCLL1Q8TB92 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 DUSP5P2-201ENST00000426873 1033 ntBASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGCLL1Q8TB92 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 C2orf69P4-201ENST00000565394 541 ntBASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCLL1Q8TB92 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 AC097658.1-201ENST00000475555 843 ntBASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 AC098934.4-201ENST00000564127 592 ntBASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCLL1Q8TB92 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCLL1Q8TB92 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCLL1Q8TB92 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCLL1Q8TB92 AL020996.1-203ENST00000536896 2307 ntBASIC19.58■□□□□ 0.73
HMGCLL1Q8TB92 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HMGCLL1Q8TB92 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCLL1Q8TB92 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCLL1Q8TB92 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.58■□□□□ 0.73
HMGCLL1Q8TB92 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.58■□□□□ 0.73
HMGCLL1Q8TB92 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCLL1Q8TB92 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCLL1Q8TB92 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms