Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLHC1Q8NHS4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 AC026271.2-201ENST00000428091 497 ntBASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 CNN2P6-201ENST00000439038 900 ntBASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.15■□□□□ 0.66
CLHC1Q8NHS4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLHC1Q8NHS4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.14■□□□□ 0.66
CLHC1Q8NHS4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLHC1Q8NHS4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLHC1Q8NHS4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLHC1Q8NHS4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.14■□□□□ 0.66
CLHC1Q8NHS4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLHC1Q8NHS4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 DUX4L16-201ENST00000555130 1264 ntBASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 RARRES2P6-201ENST00000567333 442 ntBASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 AC087289.5-201ENST00000586076 3175 ntBASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.14■□□□□ 0.65
CLHC1Q8NHS4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 AL162412.1-201ENST00000567129 965 ntBASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 AC068338.2-201ENST00000563278 1430 ntBASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLHC1Q8NHS4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 RARRES2P4-201ENST00000514074 484 ntBASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.12■□□□□ 0.65
CLHC1Q8NHS4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms