Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.61
LINS1Q8NG48 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
LINS1Q8NG48 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
LINS1Q8NG48 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LINS1Q8NG48 FEM1AP1-201ENST00000431297 1995 ntBASIC25.07■■□□□ 1.6
LINS1Q8NG48 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
LINS1Q8NG48 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
LINS1Q8NG48 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LINS1Q8NG48 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LINS1Q8NG48 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LINS1Q8NG48 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
LINS1Q8NG48 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.07■■□□□ 1.6
LINS1Q8NG48 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC25.07■■□□□ 1.6
LINS1Q8NG48 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.07■■□□□ 1.6
LINS1Q8NG48 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LINS1Q8NG48 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LINS1Q8NG48 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LINS1Q8NG48 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LINS1Q8NG48 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
LINS1Q8NG48 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LINS1Q8NG48 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
LINS1Q8NG48 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
LINS1Q8NG48 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.06■■□□□ 1.6
LINS1Q8NG48 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.06■■□□□ 1.6
LINS1Q8NG48 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LINS1Q8NG48 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
LINS1Q8NG48 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.06■■□□□ 1.6
LINS1Q8NG48 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
LINS1Q8NG48 NBPF21P-201ENST00000425093 1451 ntBASIC25.06■■□□□ 1.6
LINS1Q8NG48 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.06■■□□□ 1.6
LINS1Q8NG48 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.06■■□□□ 1.6
LINS1Q8NG48 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LINS1Q8NG48 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.06■■□□□ 1.6
LINS1Q8NG48 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LINS1Q8NG48 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LINS1Q8NG48 AC116351.2-201ENST00000606540 1585 ntBASIC25.05■■□□□ 1.6
LINS1Q8NG48 BX119927.1-201ENST00000636596 1552 ntBASIC25.05■■□□□ 1.6
LINS1Q8NG48 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
LINS1Q8NG48 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LINS1Q8NG48 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LINS1Q8NG48 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LINS1Q8NG48 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.05■■□□□ 1.6
LINS1Q8NG48 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LINS1Q8NG48 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LINS1Q8NG48 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC25.05■■□□□ 1.6
LINS1Q8NG48 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
LINS1Q8NG48 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC25.05■■□□□ 1.6
LINS1Q8NG48 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LINS1Q8NG48 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LINS1Q8NG48 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
LINS1Q8NG48 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LINS1Q8NG48 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC25.05■■□□□ 1.6
LINS1Q8NG48 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LINS1Q8NG48 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LINS1Q8NG48 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
LINS1Q8NG48 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LINS1Q8NG48 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LINS1Q8NG48 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LINS1Q8NG48 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
LINS1Q8NG48 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LINS1Q8NG48 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
LINS1Q8NG48 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LINS1Q8NG48 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
LINS1Q8NG48 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LINS1Q8NG48 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.04■■□□□ 1.6
LINS1Q8NG48 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
LINS1Q8NG48 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LINS1Q8NG48 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
LINS1Q8NG48 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.04■■□□□ 1.6
LINS1Q8NG48 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LINS1Q8NG48 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LINS1Q8NG48 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LINS1Q8NG48 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LINS1Q8NG48 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
LINS1Q8NG48 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LINS1Q8NG48 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.03■■□□□ 1.6
LINS1Q8NG48 MIR718-201ENST00000390190 70 ntBASIC25.03■■□□□ 1.6
LINS1Q8NG48 AL596275.1-201ENST00000423464 877 ntBASIC25.03■■□□□ 1.6
LINS1Q8NG48 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.03■■□□□ 1.6
LINS1Q8NG48 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.03■■□□□ 1.6
LINS1Q8NG48 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC25.03■■□□□ 1.6
LINS1Q8NG48 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
LINS1Q8NG48 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.03■■□□□ 1.6
LINS1Q8NG48 CABP2-204ENST00000636477 941 ntTSL 5 BASIC25.03■■□□□ 1.6
LINS1Q8NG48 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.03■■□□□ 1.6
LINS1Q8NG48 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LINS1Q8NG48 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
LINS1Q8NG48 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.03■■□□□ 1.6
LINS1Q8NG48 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
LINS1Q8NG48 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25.03■■□□□ 1.6
LINS1Q8NG48 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
LINS1Q8NG48 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LINS1Q8NG48 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LINS1Q8NG48 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
LINS1Q8NG48 GABARAPL3-202ENST00000624044 1851 ntBASIC25.02■■□□□ 1.6
LINS1Q8NG48 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LINS1Q8NG48 AL512408.1-201ENST00000569378 2000 ntBASIC25.02■■□□□ 1.6
LINS1Q8NG48 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
LINS1Q8NG48 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LINS1Q8NG48 AC012618.2-201ENST00000428058 849 ntBASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms