Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 AC007225.1-201ENST00000566331 1836 ntBASIC20.5■□□□□ 0.87
PAF1Q8N7H5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 RNA5SP413-201ENST00000516373 109 ntBASIC20.49■□□□□ 0.87
PAF1Q8N7H5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PAF1Q8N7H5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.48■□□□□ 0.87
PAF1Q8N7H5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.48■□□□□ 0.87
PAF1Q8N7H5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 AC073210.2-201ENST00000430369 194 ntBASIC20.47■□□□□ 0.87
PAF1Q8N7H5 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PAF1Q8N7H5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 KRT8P36-201ENST00000489121 1440 ntBASIC20.46■□□□□ 0.87
PAF1Q8N7H5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 C2orf69P4-201ENST00000565394 541 ntBASIC20.46■□□□□ 0.87
PAF1Q8N7H5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.46■□□□□ 0.87
PAF1Q8N7H5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
PAF1Q8N7H5 AL121603.2-201ENST00000557373 2117 ntBASIC20.45■□□□□ 0.86
PAF1Q8N7H5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PAF1Q8N7H5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PAF1Q8N7H5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PAF1Q8N7H5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PAF1Q8N7H5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.45■□□□□ 0.86
PAF1Q8N7H5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.45■□□□□ 0.86
PAF1Q8N7H5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PAF1Q8N7H5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PAF1Q8N7H5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PAF1Q8N7H5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms