Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 AC083906.2-201ENST00000511578 360 ntBASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 AC092666.2-201ENST00000613287 246 ntBASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 AL391422.3-201ENST00000603791 2761 ntBASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 BX276092.2-201ENST00000417668 665 ntBASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9CQ8N5M4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 KRT8P20-201ENST00000423953 1409 ntBASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 HLA-G-202ENST00000376815 851 ntBASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 HLA-G-203ENST00000376818 1127 ntBASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 AL031963.3-201ENST00000606441 850 ntBASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9CQ8N5M4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TTC9CQ8N5M4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC9CQ8N5M4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC9CQ8N5M4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC9CQ8N5M4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC9CQ8N5M4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.77■□□□□ 0.11
TTC9CQ8N5M4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC9CQ8N5M4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC9CQ8N5M4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TTC9CQ8N5M4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 NCF1B-203ENST00000435988 1254 ntBASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 AC023632.3-201ENST00000521633 145 ntBASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TTC9CQ8N5M4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms