Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 KRT18P57-201ENST00000443599 1254 ntBASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 AC244015.2-201ENST00000616358 1861 ntBASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 CYP2D8P-201ENST00000433633 1490 ntBASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEFF1Q8IYR6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 NAPSB-206ENST00000562112 1266 ntBASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TMEFF1Q8IYR6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEFF1Q8IYR6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEFF1Q8IYR6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TMEFF1Q8IYR6 AC113347.1-201ENST00000413321 391 ntBASIC19.89■□□□□ 0.77
TMEFF1Q8IYR6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
TMEFF1Q8IYR6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TMEFF1Q8IYR6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.89■□□□□ 0.77
TMEFF1Q8IYR6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMEFF1Q8IYR6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.89■□□□□ 0.77
TMEFF1Q8IYR6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMEFF1Q8IYR6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.89■□□□□ 0.77
TMEFF1Q8IYR6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 HLA-G-202ENST00000376815 851 ntBASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 HLA-G-203ENST00000376818 1127 ntBASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 Z98882.1-201ENST00000622160 2253 ntBASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.88■□□□□ 0.77
TMEFF1Q8IYR6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMEFF1Q8IYR6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms