Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD2Q8IV50 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 AC020763.4-201ENST00000623414 4170 ntBASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LYSMD2Q8IV50 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD2Q8IV50 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD2Q8IV50 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
LYSMD2Q8IV50 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.52■□□□□ 0.39
LYSMD2Q8IV50 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LYSMD2Q8IV50 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.52■□□□□ 0.39
LYSMD2Q8IV50 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 AP005435.1-201ENST00000529293 1178 ntBASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LYSMD2Q8IV50 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LYSMD2Q8IV50 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms