Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBA1AQ71U36 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBA1AQ71U36 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBA1AQ71U36 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBA1AQ71U36 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TUBA1AQ71U36 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBA1AQ71U36 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBA1AQ71U36 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBA1AQ71U36 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
TUBA1AQ71U36 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBA1AQ71U36 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 MYCNOS-205ENST00000641950 531 ntBASIC18.36■□□□□ 0.53
TUBA1AQ71U36 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBA1AQ71U36 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
TUBA1AQ71U36 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 BID-214ENST00000617586 542 ntTSL 5 BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 AC125437.2-201ENST00000625180 2167 ntBASIC18.34■□□□□ 0.53
TUBA1AQ71U36 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.34■□□□□ 0.53
TUBA1AQ71U36 AC005332.7-201ENST00000614046 2005 ntBASIC18.33■□□□□ 0.53
TUBA1AQ71U36 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TUBA1AQ71U36 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
TUBA1AQ71U36 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBA1AQ71U36 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBA1AQ71U36 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
TUBA1AQ71U36 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBA1AQ71U36 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBA1AQ71U36 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBA1AQ71U36 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TUBA1AQ71U36 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBA1AQ71U36 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBA1AQ71U36 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TUBA1AQ71U36 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms