Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTL4Q6ZR62 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 AC060766.5-201ENST00000590539 871 ntBASIC18.69■□□□□ 0.58
RTL4Q6ZR62 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
RTL4Q6ZR62 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 POU5F1P3-201ENST00000428824 1078 ntBASIC18.68■□□□□ 0.58
RTL4Q6ZR62 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.68■□□□□ 0.58
RTL4Q6ZR62 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.67■□□□□ 0.58
RTL4Q6ZR62 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTL4Q6ZR62 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 AC020907.5-201ENST00000624372 1936 ntBASIC18.66■□□□□ 0.58
RTL4Q6ZR62 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 MIR2861-201ENST00000636310 90 ntBASIC18.66■□□□□ 0.58
RTL4Q6ZR62 TMEM191A-211ENST00000637163 1067 ntBASIC18.66■□□□□ 0.58
RTL4Q6ZR62 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 FP700111.2-201ENST00000619190 1892 ntBASIC18.66■□□□□ 0.58
RTL4Q6ZR62 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTL4Q6ZR62 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 AC092368.3-202ENST00000574180 1591 ntBASIC18.65■□□□□ 0.58
RTL4Q6ZR62 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTL4Q6ZR62 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms