Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PACS1Q6VY07 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PACS1Q6VY07 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PACS1Q6VY07 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PACS1Q6VY07 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.17■□□□□ 0.82
PACS1Q6VY07 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.17■□□□□ 0.82
PACS1Q6VY07 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PACS1Q6VY07 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PACS1Q6VY07 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.17■□□□□ 0.82
PACS1Q6VY07 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PACS1Q6VY07 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PACS1Q6VY07 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.17■□□□□ 0.82
PACS1Q6VY07 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PACS1Q6VY07 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PACS1Q6VY07 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PACS1Q6VY07 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PACS1Q6VY07 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PACS1Q6VY07 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PACS1Q6VY07 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PACS1Q6VY07 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.16■□□□□ 0.82
PACS1Q6VY07 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PACS1Q6VY07 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.16■□□□□ 0.82
PACS1Q6VY07 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PACS1Q6VY07 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.16■□□□□ 0.82
PACS1Q6VY07 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PACS1Q6VY07 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PACS1Q6VY07 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PACS1Q6VY07 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.16■□□□□ 0.82
PACS1Q6VY07 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PACS1Q6VY07 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PACS1Q6VY07 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.16■□□□□ 0.82
PACS1Q6VY07 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PACS1Q6VY07 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
PACS1Q6VY07 AL356652.1-201ENST00000615962 565 ntBASIC20.16■□□□□ 0.82
PACS1Q6VY07 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PACS1Q6VY07 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PACS1Q6VY07 AC010980.2-201ENST00000587099 1412 ntBASIC20.16■□□□□ 0.82
PACS1Q6VY07 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.16■□□□□ 0.82
PACS1Q6VY07 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PACS1Q6VY07 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PACS1Q6VY07 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
PACS1Q6VY07 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS1Q6VY07 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PACS1Q6VY07 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS1Q6VY07 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS1Q6VY07 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS1Q6VY07 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PACS1Q6VY07 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.15■□□□□ 0.82
PACS1Q6VY07 AC093787.1-201ENST00000450396 207 ntBASIC20.15■□□□□ 0.82
PACS1Q6VY07 CYP2T3P-201ENST00000601990 817 ntBASIC20.15■□□□□ 0.82
PACS1Q6VY07 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS1Q6VY07 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS1Q6VY07 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.15■□□□□ 0.82
PACS1Q6VY07 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.15■□□□□ 0.82
PACS1Q6VY07 TMEM179-206ENST00000616017 1645 ntBASIC20.15■□□□□ 0.82
PACS1Q6VY07 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.15■□□□□ 0.82
PACS1Q6VY07 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.15■□□□□ 0.82
PACS1Q6VY07 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PACS1Q6VY07 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PACS1Q6VY07 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
PACS1Q6VY07 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
PACS1Q6VY07 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
PACS1Q6VY07 AC116562.4-201ENST00000641316 2276 ntBASIC20.14■□□□□ 0.81
PACS1Q6VY07 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PACS1Q6VY07 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PACS1Q6VY07 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.14■□□□□ 0.81
PACS1Q6VY07 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.14■□□□□ 0.81
PACS1Q6VY07 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PACS1Q6VY07 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PACS1Q6VY07 AC006970.2-201ENST00000450065 779 ntBASIC20.14■□□□□ 0.81
PACS1Q6VY07 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PACS1Q6VY07 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.14■□□□□ 0.81
PACS1Q6VY07 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PACS1Q6VY07 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PACS1Q6VY07 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PACS1Q6VY07 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PACS1Q6VY07 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
PACS1Q6VY07 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.13■□□□□ 0.81
PACS1Q6VY07 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS1Q6VY07 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS1Q6VY07 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS1Q6VY07 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PACS1Q6VY07 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PACS1Q6VY07 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PACS1Q6VY07 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PACS1Q6VY07 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS1Q6VY07 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.13■□□□□ 0.81
PACS1Q6VY07 AF201337.1-201ENST00000520239 748 ntBASIC20.13■□□□□ 0.81
PACS1Q6VY07 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.13■□□□□ 0.81
PACS1Q6VY07 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.13■□□□□ 0.81
PACS1Q6VY07 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.13■□□□□ 0.81
PACS1Q6VY07 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS1Q6VY07 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PACS1Q6VY07 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.13■□□□□ 0.81
PACS1Q6VY07 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PACS1Q6VY07 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS1Q6VY07 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PACS1Q6VY07 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PACS1Q6VY07 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PACS1Q6VY07 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms