Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
REEP3Q6NUK4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
REEP3Q6NUK4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
REEP3Q6NUK4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.62■□□□□ 0.57
REEP3Q6NUK4 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.62■□□□□ 0.57
REEP3Q6NUK4 PTBP1P-201ENST00000554374 1601 ntBASIC18.62■□□□□ 0.57
REEP3Q6NUK4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
REEP3Q6NUK4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
REEP3Q6NUK4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
REEP3Q6NUK4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 KRT8P17-201ENST00000453110 1448 ntBASIC18.61■□□□□ 0.57
REEP3Q6NUK4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 RARRES2P4-201ENST00000514074 484 ntBASIC18.61■□□□□ 0.57
REEP3Q6NUK4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 AC087623.3-201ENST00000607047 1098 ntBASIC18.61■□□□□ 0.57
REEP3Q6NUK4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
REEP3Q6NUK4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 MFSD11-216ENST00000590393 1141 ntBASIC18.6■□□□□ 0.57
REEP3Q6NUK4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
REEP3Q6NUK4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 AC009237.14-201ENST00000609975 1594 ntBASIC18.59■□□□□ 0.57
REEP3Q6NUK4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
REEP3Q6NUK4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
REEP3Q6NUK4 TREX1-205ENST00000625293 1783 ntBASIC18.58■□□□□ 0.57
REEP3Q6NUK4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
REEP3Q6NUK4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.58■□□□□ 0.57
REEP3Q6NUK4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 AC016769.1-201ENST00000409132 1010 ntBASIC18.58■□□□□ 0.56
REEP3Q6NUK4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
REEP3Q6NUK4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
REEP3Q6NUK4 KRT16P6-202ENST00000425692 1426 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms