Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 PNMA6B-201ENST00000538162 1200 ntBASIC20.85■□□□□ 0.93
TRNP1Q6NT89 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 AC060766.5-201ENST00000590539 871 ntBASIC20.85■□□□□ 0.93
TRNP1Q6NT89 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 AC092368.3-202ENST00000574180 1591 ntBASIC20.85■□□□□ 0.93
TRNP1Q6NT89 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRNP1Q6NT89 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.84■□□□□ 0.93
TRNP1Q6NT89 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRNP1Q6NT89 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRNP1Q6NT89 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
TRNP1Q6NT89 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRNP1Q6NT89 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.84■□□□□ 0.93
TRNP1Q6NT89 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.84■□□□□ 0.93
TRNP1Q6NT89 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.84■□□□□ 0.93
TRNP1Q6NT89 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRNP1Q6NT89 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 HLA-G-202ENST00000376815 851 ntBASIC20.83■□□□□ 0.93
TRNP1Q6NT89 HLA-G-203ENST00000376818 1127 ntBASIC20.83■□□□□ 0.93
TRNP1Q6NT89 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.83■□□□□ 0.93
TRNP1Q6NT89 AC124283.5-201ENST00000624661 1809 ntBASIC20.83■□□□□ 0.92
TRNP1Q6NT89 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.83■□□□□ 0.92
TRNP1Q6NT89 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRNP1Q6NT89 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.82■□□□□ 0.92
TRNP1Q6NT89 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRNP1Q6NT89 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.82■□□□□ 0.92
TRNP1Q6NT89 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRNP1Q6NT89 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.82■□□□□ 0.92
TRNP1Q6NT89 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRNP1Q6NT89 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRNP1Q6NT89 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRNP1Q6NT89 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRNP1Q6NT89 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.82■□□□□ 0.92
TRNP1Q6NT89 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.82■□□□□ 0.92
TRNP1Q6NT89 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TRNP1Q6NT89 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TRNP1Q6NT89 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 KRT16P6-202ENST00000425692 1426 ntBASIC20.81■□□□□ 0.92
TRNP1Q6NT89 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.81■□□□□ 0.92
TRNP1Q6NT89 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.81■□□□□ 0.92
TRNP1Q6NT89 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.8■□□□□ 0.92
TRNP1Q6NT89 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.8■□□□□ 0.92
TRNP1Q6NT89 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.8■□□□□ 0.92
TRNP1Q6NT89 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.8■□□□□ 0.92
TRNP1Q6NT89 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRNP1Q6NT89 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRNP1Q6NT89 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.8■□□□□ 0.92
TRNP1Q6NT89 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
TRNP1Q6NT89 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRNP1Q6NT89 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.8■□□□□ 0.92
TRNP1Q6NT89 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms