Protein–RNA interactions for Protein: Q6AI14

SLC9A4, Sodium/hydrogen exchanger 4, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A4Q6AI14 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 AC009237.14-201ENST00000609975 1594 ntBASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC9A4Q6AI14 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 NCF1B-203ENST00000435988 1254 ntBASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC9A4Q6AI14 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC9A4Q6AI14 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 AC092118.2-201ENST00000613495 667 ntBASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC9A4Q6AI14 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 TSPY6P-201ENST00000448518 926 ntBASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC9A4Q6AI14 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms