Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQA1Q5Y7H0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 KRT8P20-201ENST00000423953 1409 ntBASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 SMG8-203ENST00000578922 2178 ntBASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQA1Q5Y7H0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 CD99P1-205ENST00000527459 561 ntBASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 PNMA6B-201ENST00000538162 1200 ntBASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 AL031963.3-201ENST00000606441 850 ntBASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DQA1Q5Y7H0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 KRT8P17-201ENST00000453110 1448 ntBASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DQA1Q5Y7H0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HLA-DQA1Q5Y7H0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DQA1Q5Y7H0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.58■□□□□ 0.57
HLA-DQA1Q5Y7H0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DQA1Q5Y7H0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DQA1Q5Y7H0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DQA1Q5Y7H0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms