Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 MIR4651-201ENST00000582622 73 ntBASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TTC39BQ5VTQ0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 ABHD17AP1-201ENST00000358206 933 ntBASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 FAM201B-201ENST00000458407 597 ntBASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 AC023632.3-201ENST00000521633 145 ntBASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TTC39BQ5VTQ0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 POU5F1P3-201ENST00000428824 1078 ntBASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 TSPY20P-201ENST00000450910 630 ntBASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 AC026366.1-201ENST00000488803 879 ntBASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 AP003097.1-201ENST00000530657 1135 ntBASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 AC005829.2-201ENST00000571422 1056 ntBASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TTC39BQ5VTQ0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.77■□□□□ 0.91
TTC39BQ5VTQ0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TTC39BQ5VTQ0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TTC39BQ5VTQ0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TTC39BQ5VTQ0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms