Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RC3H1Q5TC82 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RC3H1Q5TC82 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC25.33■■□□□ 1.65
RC3H1Q5TC82 ATP5G1P1-201ENST00000448724 379 ntBASIC25.33■■□□□ 1.65
RC3H1Q5TC82 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RC3H1Q5TC82 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC25.33■■□□□ 1.65
RC3H1Q5TC82 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC25.33■■□□□ 1.65
RC3H1Q5TC82 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
RC3H1Q5TC82 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
RC3H1Q5TC82 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.64
RC3H1Q5TC82 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
RC3H1Q5TC82 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 AL049796.1-201ENST00000565336 1766 ntBASIC25.32■■□□□ 1.64
RC3H1Q5TC82 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 BX664615.1-201ENST00000443558 458 ntBASIC25.32■■□□□ 1.64
RC3H1Q5TC82 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.32■■□□□ 1.64
RC3H1Q5TC82 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC25.31■■□□□ 1.64
RC3H1Q5TC82 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC25.31■■□□□ 1.64
RC3H1Q5TC82 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC25.31■■□□□ 1.64
RC3H1Q5TC82 AC128688.1-201ENST00000487626 519 ntBASIC25.31■■□□□ 1.64
RC3H1Q5TC82 AC097488.1-201ENST00000507834 756 ntBASIC25.31■■□□□ 1.64
RC3H1Q5TC82 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RC3H1Q5TC82 FAM87A-204ENST00000613235 858 ntBASIC25.31■■□□□ 1.64
RC3H1Q5TC82 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
RC3H1Q5TC82 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.31■■□□□ 1.64
RC3H1Q5TC82 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
RC3H1Q5TC82 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.31■■□□□ 1.64
RC3H1Q5TC82 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RC3H1Q5TC82 Z98882.1-201ENST00000622160 2253 ntBASIC25.3■■□□□ 1.64
RC3H1Q5TC82 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RC3H1Q5TC82 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.3■■□□□ 1.64
RC3H1Q5TC82 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RC3H1Q5TC82 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.3■■□□□ 1.64
RC3H1Q5TC82 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
RC3H1Q5TC82 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
RC3H1Q5TC82 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC25.3■■□□□ 1.64
RC3H1Q5TC82 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC25.3■■□□□ 1.64
RC3H1Q5TC82 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC25.3■■□□□ 1.64
RC3H1Q5TC82 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC25.3■■□□□ 1.64
RC3H1Q5TC82 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RC3H1Q5TC82 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RC3H1Q5TC82 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.3■■□□□ 1.64
RC3H1Q5TC82 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 AC063952.2-201ENST00000498792 1227 ntBASIC25.29■■□□□ 1.64
RC3H1Q5TC82 KRT18P16-201ENST00000510337 1294 ntBASIC25.29■■□□□ 1.64
RC3H1Q5TC82 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
RC3H1Q5TC82 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 TFP1-202ENST00000475455 1573 ntBASIC25.28■■□□□ 1.64
RC3H1Q5TC82 AC116351.2-201ENST00000606540 1585 ntBASIC25.28■■□□□ 1.64
RC3H1Q5TC82 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 INGX-201ENST00000359239 846 ntBASIC25.28■■□□□ 1.64
RC3H1Q5TC82 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 AC130371.2-201ENST00000619443 611 ntBASIC25.28■■□□□ 1.64
RC3H1Q5TC82 AC131212.4-201ENST00000623606 975 ntBASIC25.28■■□□□ 1.64
RC3H1Q5TC82 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RC3H1Q5TC82 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
RC3H1Q5TC82 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms