Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.11■□□□□ 0.49
PDSS1Q5T2R2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 HLA-G-202ENST00000376815 851 ntBASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 HLA-G-203ENST00000376818 1127 ntBASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
PDSS1Q5T2R2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 AC023632.3-201ENST00000521633 145 ntBASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 PNMA6B-201ENST00000538162 1200 ntBASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.09■□□□□ 0.49
PDSS1Q5T2R2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PDSS1Q5T2R2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PDSS1Q5T2R2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PDSS1Q5T2R2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDSS1Q5T2R2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDSS1Q5T2R2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.08■□□□□ 0.49
PDSS1Q5T2R2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PDSS1Q5T2R2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDSS1Q5T2R2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.48
PDSS1Q5T2R2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDSS1Q5T2R2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.08■□□□□ 0.48
PDSS1Q5T2R2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.08■□□□□ 0.48
PDSS1Q5T2R2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDSS1Q5T2R2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDSS1Q5T2R2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDSS1Q5T2R2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDSS1Q5T2R2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.08■□□□□ 0.48
PDSS1Q5T2R2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDSS1Q5T2R2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDSS1Q5T2R2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.07■□□□□ 0.48
PDSS1Q5T2R2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDSS1Q5T2R2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDSS1Q5T2R2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDSS1Q5T2R2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms