Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 CD99P1-205ENST00000527459 561 ntBASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LDLRAP1Q5SW96 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 KRT8P17-201ENST00000453110 1448 ntBASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.86■□□□□ 0.77
LDLRAP1Q5SW96 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 SMG8-203ENST00000578922 2178 ntBASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LDLRAP1Q5SW96 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 UNC93B5-201ENST00000530315 699 ntBASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LDLRAP1Q5SW96 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.83■□□□□ 0.77
LDLRAP1Q5SW96 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDLRAP1Q5SW96 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDLRAP1Q5SW96 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDLRAP1Q5SW96 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.83■□□□□ 0.77
LDLRAP1Q5SW96 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LDLRAP1Q5SW96 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.83■□□□□ 0.77
LDLRAP1Q5SW96 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.83■□□□□ 0.77
LDLRAP1Q5SW96 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LDLRAP1Q5SW96 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.83■□□□□ 0.77
LDLRAP1Q5SW96 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.83■□□□□ 0.77
LDLRAP1Q5SW96 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.83■□□□□ 0.77
LDLRAP1Q5SW96 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LDLRAP1Q5SW96 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LDLRAP1Q5SW96 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.83■□□□□ 0.76
LDLRAP1Q5SW96 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
LDLRAP1Q5SW96 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LDLRAP1Q5SW96 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
LDLRAP1Q5SW96 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.83■□□□□ 0.76
LDLRAP1Q5SW96 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LDLRAP1Q5SW96 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LDLRAP1Q5SW96 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms