Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP13A4Q4VNC1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP13A4Q4VNC1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP13A4Q4VNC1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
ATP13A4Q4VNC1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP13A4Q4VNC1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ATP13A4Q4VNC1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP13A4Q4VNC1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP13A4Q4VNC1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
ATP13A4Q4VNC1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP13A4Q4VNC1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP13A4Q4VNC1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP13A4Q4VNC1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP13A4Q4VNC1 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.83■□□□□ 0.93
ATP13A4Q4VNC1 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP13A4Q4VNC1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATP13A4Q4VNC1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.83■□□□□ 0.92
ATP13A4Q4VNC1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP13A4Q4VNC1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP13A4Q4VNC1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP13A4Q4VNC1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP13A4Q4VNC1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 MIR663A-201ENST00000385250 93 ntBASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 C2orf69P4-201ENST00000565394 541 ntBASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 AC105036.2-201ENST00000569468 176 ntBASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 AL589743.5-201ENST00000616611 1050 ntBASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 AC007952.6-201ENST00000573168 2673 ntBASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 AC003957.1-201ENST00000625108 2673 ntBASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 TMEM179-206ENST00000616017 1645 ntBASIC20.82■□□□□ 0.92
ATP13A4Q4VNC1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 AF201337.1-201ENST00000520239 748 ntBASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATP13A4Q4VNC1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP13A4Q4VNC1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ATP13A4Q4VNC1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP13A4Q4VNC1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP13A4Q4VNC1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP13A4Q4VNC1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP13A4Q4VNC1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP13A4Q4VNC1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP13A4Q4VNC1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.79■□□□□ 0.92
ATP13A4Q4VNC1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.79■□□□□ 0.92
ATP13A4Q4VNC1 AL031963.3-201ENST00000606441 850 ntBASIC20.79■□□□□ 0.92
ATP13A4Q4VNC1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.79■□□□□ 0.92
ATP13A4Q4VNC1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP13A4Q4VNC1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP13A4Q4VNC1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms