Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RFX4Q33E94 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.55■□□□□ 0.56
RFX4Q33E94 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFX4Q33E94 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX4Q33E94 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX4Q33E94 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX4Q33E94 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX4Q33E94 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX4Q33E94 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX4Q33E94 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX4Q33E94 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RFX4Q33E94 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RFX4Q33E94 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX4Q33E94 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFX4Q33E94 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.54■□□□□ 0.56
RFX4Q33E94 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.54■□□□□ 0.56
RFX4Q33E94 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFX4Q33E94 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.54■□□□□ 0.56
RFX4Q33E94 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.54■□□□□ 0.56
RFX4Q33E94 AC120498.10-201ENST00000621827 505 ntBASIC18.54■□□□□ 0.56
RFX4Q33E94 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.54■□□□□ 0.56
RFX4Q33E94 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX4Q33E94 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RFX4Q33E94 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX4Q33E94 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX4Q33E94 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.53■□□□□ 0.56
RFX4Q33E94 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFX4Q33E94 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.53■□□□□ 0.56
RFX4Q33E94 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.53■□□□□ 0.56
RFX4Q33E94 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RFX4Q33E94 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX4Q33E94 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.53■□□□□ 0.56
RFX4Q33E94 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.53■□□□□ 0.56
RFX4Q33E94 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.53■□□□□ 0.56
RFX4Q33E94 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.53■□□□□ 0.56
RFX4Q33E94 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX4Q33E94 DPP3P2-201ENST00000416030 1696 ntBASIC18.53■□□□□ 0.56
RFX4Q33E94 AC093503.3-201ENST00000624917 2352 ntBASIC18.53■□□□□ 0.56
RFX4Q33E94 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RFX4Q33E94 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.53■□□□□ 0.56
RFX4Q33E94 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.53■□□□□ 0.56
RFX4Q33E94 AC116050.2-201ENST00000612102 1779 ntBASIC18.53■□□□□ 0.56
RFX4Q33E94 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RFX4Q33E94 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.52■□□□□ 0.56
RFX4Q33E94 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RFX4Q33E94 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.52■□□□□ 0.56
RFX4Q33E94 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
RFX4Q33E94 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.52■□□□□ 0.56
RFX4Q33E94 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.52■□□□□ 0.56
RFX4Q33E94 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RFX4Q33E94 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.52■□□□□ 0.56
RFX4Q33E94 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RFX4Q33E94 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RFX4Q33E94 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RFX4Q33E94 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFX4Q33E94 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RFX4Q33E94 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
RFX4Q33E94 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.52■□□□□ 0.55
RFX4Q33E94 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RFX4Q33E94 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.51■□□□□ 0.55
RFX4Q33E94 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.51■□□□□ 0.55
RFX4Q33E94 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.51■□□□□ 0.55
RFX4Q33E94 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RFX4Q33E94 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.51■□□□□ 0.55
RFX4Q33E94 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 AC027612.3-201ENST00000413684 1047 ntBASIC18.51■□□□□ 0.55
RFX4Q33E94 AC010141.2-201ENST00000452426 721 ntBASIC18.51■□□□□ 0.55
RFX4Q33E94 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.51■□□□□ 0.55
RFX4Q33E94 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.51■□□□□ 0.55
RFX4Q33E94 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RFX4Q33E94 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RFX4Q33E94 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RFX4Q33E94 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms