Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.46■□□□□ 0.71
RSPO4Q2I0M5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 B3GAT3P1-201ENST00000471720 806 ntBASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 AC023632.3-201ENST00000521633 145 ntBASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 RN7SL510P-201ENST00000581311 263 ntBASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RSPO4Q2I0M5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 HOMER2P1-201ENST00000455653 964 ntBASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 AC026271.3-201ENST00000571884 352 ntBASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 AC130371.2-201ENST00000619443 611 ntBASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RSPO4Q2I0M5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 AL359075.1-203ENST00000462729 1002 ntBASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 CR769767.2-201ENST00000622735 460 ntBASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO4Q2I0M5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 TSPY21P-201ENST00000433481 731 ntBASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 TSPY23P-201ENST00000440136 739 ntBASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 AC141257.4-201ENST00000634557 245 ntBASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 AC136944.6-201ENST00000634818 245 ntBASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 AC116562.4-202ENST00000641738 218 ntBASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.42■□□□□ 0.7
RSPO4Q2I0M5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO4Q2I0M5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms