Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1EQ15878 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1EQ15878 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.54■□□□□ 0.72
CACNA1EQ15878 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1EQ15878 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.54■□□□□ 0.72
CACNA1EQ15878 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.54■□□□□ 0.72
CACNA1EQ15878 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1EQ15878 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1EQ15878 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1EQ15878 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1EQ15878 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1EQ15878 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CACNA1EQ15878 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1EQ15878 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1EQ15878 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1EQ15878 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1EQ15878 CR392000.1-201ENST00000624770 1228 ntBASIC19.54■□□□□ 0.72
CACNA1EQ15878 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1EQ15878 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1EQ15878 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1EQ15878 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1EQ15878 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CACNA1EQ15878 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1EQ15878 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1EQ15878 AL121603.2-201ENST00000557373 2117 ntBASIC19.53■□□□□ 0.72
CACNA1EQ15878 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNA1EQ15878 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNA1EQ15878 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.53■□□□□ 0.72
CACNA1EQ15878 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1EQ15878 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.53■□□□□ 0.72
CACNA1EQ15878 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.53■□□□□ 0.72
CACNA1EQ15878 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1EQ15878 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1EQ15878 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.53■□□□□ 0.72
CACNA1EQ15878 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNA1EQ15878 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
CACNA1EQ15878 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1EQ15878 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1EQ15878 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1EQ15878 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.53■□□□□ 0.72
CACNA1EQ15878 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.53■□□□□ 0.72
CACNA1EQ15878 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1EQ15878 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.53■□□□□ 0.72
CACNA1EQ15878 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNA1EQ15878 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1EQ15878 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1EQ15878 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1EQ15878 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1EQ15878 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1EQ15878 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1EQ15878 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNA1EQ15878 DGCR10-201ENST00000609839 495 ntBASIC19.52■□□□□ 0.72
CACNA1EQ15878 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNA1EQ15878 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CACNA1EQ15878 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.52■□□□□ 0.72
CACNA1EQ15878 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CACNA1EQ15878 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CACNA1EQ15878 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CACNA1EQ15878 MESTP1-201ENST00000404287 994 ntBASIC19.52■□□□□ 0.71
CACNA1EQ15878 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.52■□□□□ 0.71
CACNA1EQ15878 AC011506.1-201ENST00000474329 610 ntBASIC19.52■□□□□ 0.71
CACNA1EQ15878 NAPSB-206ENST00000562112 1266 ntBASIC19.52■□□□□ 0.71
CACNA1EQ15878 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CACNA1EQ15878 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CACNA1EQ15878 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CACNA1EQ15878 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CACNA1EQ15878 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.51■□□□□ 0.71
CACNA1EQ15878 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.51■□□□□ 0.71
CACNA1EQ15878 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 AC087388.1-201ENST00000571370 1112 ntBASIC19.51■□□□□ 0.71
CACNA1EQ15878 AP005242.2-201ENST00000580065 1175 ntBASIC19.51■□□□□ 0.71
CACNA1EQ15878 AL121894.2-201ENST00000602977 491 ntBASIC19.51■□□□□ 0.71
CACNA1EQ15878 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CACNA1EQ15878 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CACNA1EQ15878 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.5■□□□□ 0.71
CACNA1EQ15878 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1EQ15878 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1EQ15878 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1EQ15878 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1EQ15878 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1EQ15878 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1EQ15878 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1EQ15878 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1EQ15878 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1EQ15878 AC104076.2-201ENST00000448912 469 ntBASIC19.5■□□□□ 0.71
CACNA1EQ15878 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1EQ15878 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms