Protein–RNA interactions for Protein: Q05543

RTT103, Regulator of Ty1 transposition protein 103, yeastyeast

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTT103Q05543 YHR131W-AYHR131W-A 246 nt1.21□□□□□ -2.22
RTT103Q05543 YLR282CYLR282C 342 nt1.21□□□□□ -2.22
RTT103Q05543 MSN5YDR335W 3675 nt1.21□□□□□ -2.22
RTT103Q05543 AZF1YOR113W 2745 nt1.21□□□□□ -2.22
RTT103Q05543 NUT1YGL151W 3399 nt1.21□□□□□ -2.22
RTT103Q05543 CAT8YMR280C 4302 nt1.2□□□□□ -2.22
RTT103Q05543 NUP192YJL039C 5052 nt1.19□□□□□ -2.22
RTT103Q05543 YLL020CYLL020C 306 nt1.19□□□□□ -2.22
RTT103Q05543 YJR029WYJR029W 5268 nt1.19□□□□□ -2.22
RTT103Q05543 YPR137C-BYPR137C-B 5268 nt1.19□□□□□ -2.22
RTT103Q05543 YHR217CYHR217C 462 nt1.18□□□□□ -2.22
RTT103Q05543 SET3YKR029C 2256 nt1.17□□□□□ -2.22
RTT103Q05543 snR61snR61 90 nt1.17□□□□□ -2.22
RTT103Q05543 COX5BYIL111W 456 nt1.17□□□□□ -2.22
RTT103Q05543 CDC39YCR093W 6327 nt1.17□□□□□ -2.22
RTT103Q05543 FYV10YIL097W 1551 nt1.17□□□□□ -2.22
RTT103Q05543 EAF1YDR359C 2949 nt1.16□□□□□ -2.22
RTT103Q05543 YML002WYML002W 2214 nt1.16□□□□□ -2.22
RTT103Q05543 WAR1YML076C 2835 nt1.16□□□□□ -2.22
RTT103Q05543 CDC25YLR310C 4770 nt1.16□□□□□ -2.22
RTT103Q05543 YKL100W-AYKL100W-A 90 nt1.15□□□□□ -2.23
RTT103Q05543 YGL041C-BYGL041C-B 183 nt1.14□□□□□ -2.23
RTT103Q05543 ALY2YJL084C 3141 nt1.14□□□□□ -2.23
RTT103Q05543 NOP9YJL010C 2001 nt1.13□□□□□ -2.23
RTT103Q05543 snR190snR190 190 nt1.13□□□□□ -2.23
RTT103Q05543 RCO1YMR075W 2055 nt1.12□□□□□ -2.23
RTT103Q05543 APL3YBL037W 3078 nt1.12□□□□□ -2.23
RTT103Q05543 PAN2YGL094C 3348 nt1.12□□□□□ -2.23
RTT103Q05543 BUD3YCL014W 4911 nt1.12□□□□□ -2.23
RTT103Q05543 tM(CAU)Q2tM(CAU)Q2 78 nt1.12□□□□□ -2.23
RTT103Q05543 SWI4YER111C 3282 nt1.11□□□□□ -2.23
RTT103Q05543 YLR232WYLR232W 348 nt1.1□□□□□ -2.23
RTT103Q05543 NST1YNL091W 3723 nt1.1□□□□□ -2.23
RTT103Q05543 YDR210WYDR210W 228 nt1.09□□□□□ -2.23
RTT103Q05543 YDL247W-AYDL247W-A 75 nt1.08□□□□□ -2.24
RTT103Q05543 tH(GUG)E1tH(GUG)E1 72 nt1.08□□□□□ -2.24
RTT103Q05543 tH(GUG)E2tH(GUG)E2 72 nt1.08□□□□□ -2.24
RTT103Q05543 tH(GUG)G1tH(GUG)G1 72 nt1.08□□□□□ -2.24
RTT103Q05543 tH(GUG)G2tH(GUG)G2 72 nt1.08□□□□□ -2.24
RTT103Q05543 tH(GUG)HtH(GUG)H 72 nt1.08□□□□□ -2.24
RTT103Q05543 tH(GUG)KtH(GUG)K 72 nt1.08□□□□□ -2.24
RTT103Q05543 tH(GUG)MtH(GUG)M 72 nt1.08□□□□□ -2.24
RTT103Q05543 YLR041WYLR041W 321 nt1.08□□□□□ -2.24
RTT103Q05543 ASE1YOR058C 2658 nt1.08□□□□□ -2.24
RTT103Q05543 YJL127W-AYJL127W-A 117 nt1.07□□□□□ -2.24
RTT103Q05543 RPL26BYGR034W 384 nt1.06□□□□□ -2.24
RTT103Q05543 YBR200W-AYBR200W-A 165 nt1.06□□□□□ -2.24
RTT103Q05543 MSH3YCR092C 3057 nt1.06□□□□□ -2.24
RTT103Q05543 STF2YGR008C 255 nt1.05□□□□□ -2.24
RTT103Q05543 COG6YNL041C 2520 nt1.04□□□□□ -2.24
RTT103Q05543 SEC3YER008C 4011 nt1.04□□□□□ -2.24
RTT103Q05543 PRP16YKR086W 3216 nt1.04□□□□□ -2.24
RTT103Q05543 tN(GUU)QtN(GUU)Q 71 nt1.03□□□□□ -2.24
RTT103Q05543 VAM6YDL077C 3150 nt1.02□□□□□ -2.25
RTT103Q05543 SBH1YER087C-B 249 nt1.02□□□□□ -2.25
RTT103Q05543 KAP120YPL125W 3099 nt1.02□□□□□ -2.25
RTT103Q05543 LAA1YJL207C 6045 nt1.02□□□□□ -2.25
RTT103Q05543 SEC1YDR164C 2175 nt1.01□□□□□ -2.25
RTT103Q05543 NUP145YGL092W 3954 nt1□□□□□ -2.25
RTT103Q05543 YDL073WYDL073W 2955 nt0.99□□□□□ -2.25
RTT103Q05543 BIR1YJR089W 2865 nt0.99□□□□□ -2.25
RTT103Q05543 snR81snR81 201 nt0.99□□□□□ -2.25
RTT103Q05543 BEM3YPL115C 3387 nt0.99□□□□□ -2.25
RTT103Q05543 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
RTT103Q05543 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
RTT103Q05543 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
RTT103Q05543 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
RTT103Q05543 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
RTT103Q05543 YIL142C-AYIL142C-A 333 nt0.98□□□□□ -2.25
RTT103Q05543 YNL266WYNL266W 420 nt0.98□□□□□ -2.25
RTT103Q05543 SPT7YBR081C 3999 nt0.98□□□□□ -2.25
RTT103Q05543 tS(GCU)Q1tS(GCU)Q1 86 nt0.97□□□□□ -2.25
RTT103Q05543 YBR072C-AYBR072C-A 162 nt0.97□□□□□ -2.25
RTT103Q05543 UBP3YER151C 2739 nt0.96□□□□□ -2.26
RTT103Q05543 YGR146C-AYGR146C-A 162 nt0.96□□□□□ -2.26
RTT103Q05543 tV(UAC)BtV(UAC)B 74 nt0.96□□□□□ -2.26
RTT103Q05543 tV(UAC)DtV(UAC)D 74 nt0.96□□□□□ -2.26
RTT103Q05543 RKR1YMR247C 4689 nt0.94□□□□□ -2.26
RTT103Q05543 ANS1YHR126C 480 nt0.94□□□□□ -2.26
RTT103Q05543 SEC8YPR055W 3198 nt0.94□□□□□ -2.26
RTT103Q05543 YLL066W-BYLL066W-B 171 nt0.93□□□□□ -2.26
RTT103Q05543 CLU1YMR012W 3834 nt0.93□□□□□ -2.26
RTT103Q05543 YOL083C-AYOL083C-A 141 nt0.93□□□□□ -2.26
RTT103Q05543 YPR160W-AYPR160W-A 81 nt0.93□□□□□ -2.26
RTT103Q05543 snR45snR45 172 nt0.93□□□□□ -2.26
RTT103Q05543 SIP4YJL089W 2490 nt0.9□□□□□ -2.27
RTT103Q05543 YCS4YLR272C 3531 nt0.9□□□□□ -2.27
RTT103Q05543 YAL037C-AYAL037C-A 93 nt0.89□□□□□ -2.27
RTT103Q05543 YLR399W-AYLR399W-A 105 nt0.89□□□□□ -2.27
RTT103Q05543 SCC2YDR180W 4482 nt0.89□□□□□ -2.27
RTT103Q05543 YGR130CYGR130C 2451 nt0.89□□□□□ -2.27
RTT103Q05543 NNF2YGR089W 2811 nt0.88□□□□□ -2.27
RTT103Q05543 IML1YJR138W 4755 nt0.88□□□□□ -2.27
RTT103Q05543 ROM2YLR371W 4071 nt0.88□□□□□ -2.27
RTT103Q05543 YPR117WYPR117W 7470 nt0.87□□□□□ -2.27
RTT103Q05543 BEM2YER155C 6504 nt0.87□□□□□ -2.27
RTT103Q05543 YBL071C-BYBL071C-B 99 nt0.87□□□□□ -2.27
RTT103Q05543 YBR196C-AYBR196C-A 150 nt0.86□□□□□ -2.27
RTT103Q05543 SEC10YLR166C 2616 nt0.85□□□□□ -2.27
RTT103Q05543 CSE1YGL238W 2883 nt0.84□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 25.1 ms