Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 SMG8-203ENST00000578922 2178 ntBASIC15.24■□□□□ 0.03
HIST1H1AQ02539 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 UBE2DNL-204ENST00000602536 740 ntBASIC15.24■□□□□ 0.03
HIST1H1AQ02539 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST1H1AQ02539 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 AC019069.1-201ENST00000610008 1333 ntBASIC15.23■□□□□ 0.03
HIST1H1AQ02539 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 AC091799.1-201ENST00000422823 811 ntBASIC15.23■□□□□ 0.03
HIST1H1AQ02539 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 CDV3P1-201ENST00000471403 739 ntBASIC15.23■□□□□ 0.03
HIST1H1AQ02539 SLC7A5P1-201ENST00000568957 537 ntBASIC15.23■□□□□ 0.03
HIST1H1AQ02539 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 AC243732.1-201ENST00000612648 864 ntBASIC15.23■□□□□ 0.03
HIST1H1AQ02539 MIR2861-201ENST00000636310 90 ntBASIC15.23■□□□□ 0.03
HIST1H1AQ02539 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST1H1AQ02539 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST1H1AQ02539 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HIST1H1AQ02539 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms