Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL20P78556 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL20P78556 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL20P78556 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.73■□□□□ 0.11
CCL20P78556 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.73■□□□□ 0.11
CCL20P78556 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CCL20P78556 TSPY13P-201ENST00000338964 914 ntBASIC15.73■□□□□ 0.11
CCL20P78556 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CCL20P78556 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL20P78556 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCL20P78556 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL20P78556 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.73■□□□□ 0.11
CCL20P78556 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCL20P78556 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL20P78556 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL20P78556 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL20P78556 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL20P78556 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL20P78556 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
CCL20P78556 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL20P78556 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL20P78556 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CCL20P78556 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL20P78556 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.72■□□□□ 0.11
CCL20P78556 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL20P78556 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CCL20P78556 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL20P78556 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL20P78556 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL20P78556 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCL20P78556 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL20P78556 GUK1-208ENST00000366728 842 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL20P78556 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CCL20P78556 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.72■□□□□ 0.11
CCL20P78556 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL20P78556 SMUG1P1-201ENST00000590640 811 ntBASIC15.72■□□□□ 0.11
CCL20P78556 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCL20P78556 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL20P78556 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL20P78556 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.72■□□□□ 0.11
CCL20P78556 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL20P78556 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.72■□□□□ 0.11
CCL20P78556 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.72■□□□□ 0.11
CCL20P78556 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL20P78556 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCL20P78556 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
CCL20P78556 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCL20P78556 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCL20P78556 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL20P78556 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCL20P78556 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL20P78556 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL20P78556 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL20P78556 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL20P78556 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.71■□□□□ 0.11
CCL20P78556 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.71■□□□□ 0.11
CCL20P78556 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.71■□□□□ 0.11
CCL20P78556 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL20P78556 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCL20P78556 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.71■□□□□ 0.11
CCL20P78556 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
CCL20P78556 AP005435.1-201ENST00000529293 1178 ntBASIC15.71■□□□□ 0.11
CCL20P78556 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL20P78556 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL20P78556 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL20P78556 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCL20P78556 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCL20P78556 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCL20P78556 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.71■□□□□ 0.1
CCL20P78556 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CCL20P78556 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCL20P78556 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL20P78556 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCL20P78556 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL20P78556 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL20P78556 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL20P78556 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCL20P78556 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCL20P78556 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL20P78556 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL20P78556 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL20P78556 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCL20P78556 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
CCL20P78556 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL20P78556 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL20P78556 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL20P78556 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL20P78556 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL20P78556 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL20P78556 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL20P78556 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL20P78556 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL20P78556 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL20P78556 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL20P78556 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCL20P78556 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCL20P78556 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL20P78556 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL20P78556 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL20P78556 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms