Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-1P78426 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-1P78426 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-1P78426 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX6-1P78426 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX6-1P78426 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-1P78426 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-1P78426 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-1P78426 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-1P78426 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-1P78426 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-1P78426 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-1P78426 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-1P78426 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-1P78426 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.56■□□□□ 0.4
NKX6-1P78426 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.56■□□□□ 0.4
NKX6-1P78426 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.56■□□□□ 0.4
NKX6-1P78426 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NKX6-1P78426 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.56■□□□□ 0.4
NKX6-1P78426 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-1P78426 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-1P78426 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-1P78426 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NKX6-1P78426 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX6-1P78426 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX6-1P78426 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NKX6-1P78426 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX6-1P78426 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-1P78426 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-1P78426 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-1P78426 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NKX6-1P78426 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX6-1P78426 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-1P78426 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-1P78426 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-1P78426 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-1P78426 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-1P78426 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-1P78426 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.55■□□□□ 0.4
NKX6-1P78426 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
NKX6-1P78426 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.55■□□□□ 0.4
NKX6-1P78426 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-1P78426 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.55■□□□□ 0.4
NKX6-1P78426 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
NKX6-1P78426 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
NKX6-1P78426 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-1P78426 PLK5-205ENST00000642079 1969 ntBASIC17.55■□□□□ 0.4
NKX6-1P78426 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-1P78426 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NKX6-1P78426 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NKX6-1P78426 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NKX6-1P78426 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX6-1P78426 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NKX6-1P78426 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-1P78426 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-1P78426 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.54■□□□□ 0.4
NKX6-1P78426 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-1P78426 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX6-1P78426 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-1P78426 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NKX6-1P78426 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-1P78426 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
NKX6-1P78426 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-1P78426 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-1P78426 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX6-1P78426 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.54■□□□□ 0.4
NKX6-1P78426 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX6-1P78426 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.54■□□□□ 0.4
NKX6-1P78426 KRT18P21-201ENST00000515767 1272 ntBASIC17.54■□□□□ 0.4
NKX6-1P78426 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX6-1P78426 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-1P78426 SOX15-203ENST00000570788 1093 ntBASIC17.54■□□□□ 0.4
NKX6-1P78426 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.54■□□□□ 0.4
NKX6-1P78426 MIR2861-201ENST00000636310 90 ntBASIC17.54■□□□□ 0.4
NKX6-1P78426 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
NKX6-1P78426 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-1P78426 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX6-1P78426 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-1P78426 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.54■□□□□ 0.4
NKX6-1P78426 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NKX6-1P78426 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NKX6-1P78426 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
NKX6-1P78426 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.53■□□□□ 0.4
NKX6-1P78426 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.53■□□□□ 0.4
NKX6-1P78426 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.53■□□□□ 0.4
NKX6-1P78426 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.53■□□□□ 0.4
NKX6-1P78426 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.53■□□□□ 0.4
NKX6-1P78426 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.53■□□□□ 0.4
NKX6-1P78426 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms