Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.56■□□□□ 0.4
LSM6P62312 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LSM6P62312 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM6P62312 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LSM6P62312 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LSM6P62312 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.56■□□□□ 0.4
LSM6P62312 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM6P62312 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM6P62312 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LSM6P62312 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LSM6P62312 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSM6P62312 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSM6P62312 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.55■□□□□ 0.4
LSM6P62312 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM6P62312 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.55■□□□□ 0.4
LSM6P62312 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LSM6P62312 BX276092.2-201ENST00000417668 665 ntBASIC17.55■□□□□ 0.4
LSM6P62312 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.55■□□□□ 0.4
LSM6P62312 AC006970.2-201ENST00000450065 779 ntBASIC17.55■□□□□ 0.4
LSM6P62312 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.55■□□□□ 0.4
LSM6P62312 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.55■□□□□ 0.4
LSM6P62312 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.55■□□□□ 0.4
LSM6P62312 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LSM6P62312 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSM6P62312 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSM6P62312 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSM6P62312 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.55■□□□□ 0.4
LSM6P62312 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM6P62312 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM6P62312 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSM6P62312 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.55■□□□□ 0.4
LSM6P62312 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSM6P62312 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM6P62312 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM6P62312 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.54■□□□□ 0.4
LSM6P62312 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LSM6P62312 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.54■□□□□ 0.4
LSM6P62312 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM6P62312 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LSM6P62312 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM6P62312 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.54■□□□□ 0.4
LSM6P62312 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.54■□□□□ 0.4
LSM6P62312 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LSM6P62312 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM6P62312 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM6P62312 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM6P62312 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM6P62312 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSM6P62312 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSM6P62312 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LSM6P62312 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LSM6P62312 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSM6P62312 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM6P62312 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM6P62312 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.53■□□□□ 0.4
LSM6P62312 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM6P62312 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM6P62312 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM6P62312 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM6P62312 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.53■□□□□ 0.4
LSM6P62312 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM6P62312 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSM6P62312 AC083906.2-201ENST00000511578 360 ntBASIC17.53■□□□□ 0.4
LSM6P62312 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.53■□□□□ 0.4
LSM6P62312 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.53■□□□□ 0.4
LSM6P62312 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.53■□□□□ 0.4
LSM6P62312 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.53■□□□□ 0.4
LSM6P62312 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.53■□□□□ 0.4
LSM6P62312 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM6P62312 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LSM6P62312 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM6P62312 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSM6P62312 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM6P62312 AFG3L1P-217ENST00000557444 2447 ntBASIC17.52■□□□□ 0.4
LSM6P62312 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSM6P62312 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.52■□□□□ 0.4
LSM6P62312 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LSM6P62312 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM6P62312 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM6P62312 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM6P62312 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM6P62312 GPX1P1-201ENST00000388829 606 ntBASIC17.52■□□□□ 0.4
LSM6P62312 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LSM6P62312 MIPEPP3-201ENST00000412105 444 ntBASIC17.52■□□□□ 0.4
LSM6P62312 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.52■□□□□ 0.4
LSM6P62312 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LSM6P62312 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSM6P62312 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM6P62312 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSM6P62312 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.52■□□□□ 0.39
LSM6P62312 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSM6P62312 AC009237.14-201ENST00000609975 1594 ntBASIC17.52■□□□□ 0.39
LSM6P62312 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LSM6P62312 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.52■□□□□ 0.39
LSM6P62312 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
LSM6P62312 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.51■□□□□ 0.39
LSM6P62312 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.51■□□□□ 0.39
LSM6P62312 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LSM6P62312 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LSM6P62312 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms