Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDC42P60953 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.24■□□□□ 0.51
CDC42P60953 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC42P60953 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDC42P60953 TPRG1LP1-201ENST00000598702 760 ntBASIC18.24■□□□□ 0.51
CDC42P60953 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC42P60953 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.24■□□□□ 0.51
CDC42P60953 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDC42P60953 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.24■□□□□ 0.51
CDC42P60953 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC42P60953 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CDC42P60953 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDC42P60953 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.23■□□□□ 0.51
CDC42P60953 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.23■□□□□ 0.51
CDC42P60953 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.23■□□□□ 0.51
CDC42P60953 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CDC42P60953 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.23■□□□□ 0.51
CDC42P60953 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.23■□□□□ 0.51
CDC42P60953 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CDC42P60953 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42P60953 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.23■□□□□ 0.51
CDC42P60953 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42P60953 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42P60953 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42P60953 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CDC42P60953 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42P60953 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42P60953 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDC42P60953 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.23■□□□□ 0.51
CDC42P60953 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
CDC42P60953 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.23■□□□□ 0.51
CDC42P60953 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.23■□□□□ 0.51
CDC42P60953 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42P60953 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.23■□□□□ 0.51
CDC42P60953 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42P60953 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDC42P60953 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42P60953 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42P60953 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42P60953 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42P60953 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.23■□□□□ 0.51
CDC42P60953 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDC42P60953 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.22■□□□□ 0.51
CDC42P60953 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.22■□□□□ 0.51
CDC42P60953 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDC42P60953 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.22■□□□□ 0.51
CDC42P60953 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.22■□□□□ 0.51
CDC42P60953 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.22■□□□□ 0.51
CDC42P60953 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 FAM21FP-204ENST00000608637 956 ntBASIC18.22■□□□□ 0.51
CDC42P60953 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.22■□□□□ 0.51
CDC42P60953 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CDC42P60953 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDC42P60953 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC42P60953 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC42P60953 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDC42P60953 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.21■□□□□ 0.51
CDC42P60953 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.21■□□□□ 0.51
CDC42P60953 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDC42P60953 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDC42P60953 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.21■□□□□ 0.51
CDC42P60953 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC42P60953 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC42P60953 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDC42P60953 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDC42P60953 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.21■□□□□ 0.51
CDC42P60953 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.21■□□□□ 0.51
CDC42P60953 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.21■□□□□ 0.51
CDC42P60953 AC131212.1-201ENST00000613771 668 ntBASIC18.21■□□□□ 0.51
CDC42P60953 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC42P60953 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.21■□□□□ 0.51
CDC42P60953 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDC42P60953 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC42P60953 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.21■□□□□ 0.51
CDC42P60953 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC42P60953 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC42P60953 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CDC42P60953 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDC42P60953 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.2■□□□□ 0.5
CDC42P60953 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDC42P60953 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CDC42P60953 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.2■□□□□ 0.5
CDC42P60953 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.2■□□□□ 0.5
CDC42P60953 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.2■□□□□ 0.5
CDC42P60953 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDC42P60953 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDC42P60953 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.2■□□□□ 0.5
CDC42P60953 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms