Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC26.21■■□□□ 1.79
RIPK4P57078 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
RIPK4P57078 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RIPK4P57078 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC26.21■■□□□ 1.79
RIPK4P57078 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RIPK4P57078 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
RIPK4P57078 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RIPK4P57078 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.2■■□□□ 1.79
RIPK4P57078 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
RIPK4P57078 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RIPK4P57078 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC26.2■■□□□ 1.78
RIPK4P57078 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RIPK4P57078 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RIPK4P57078 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC26.2■■□□□ 1.78
RIPK4P57078 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RIPK4P57078 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RIPK4P57078 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIPK4P57078 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RIPK4P57078 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RIPK4P57078 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.19■■□□□ 1.78
RIPK4P57078 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RIPK4P57078 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.19■■□□□ 1.78
RIPK4P57078 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.19■■□□□ 1.78
RIPK4P57078 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC26.19■■□□□ 1.78
RIPK4P57078 BX119927.1-201ENST00000636596 1552 ntBASIC26.19■■□□□ 1.78
RIPK4P57078 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RIPK4P57078 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC26.19■■□□□ 1.78
RIPK4P57078 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RIPK4P57078 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RIPK4P57078 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RIPK4P57078 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RIPK4P57078 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC26.18■■□□□ 1.78
RIPK4P57078 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RIPK4P57078 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC26.18■■□□□ 1.78
RIPK4P57078 GCSHP5-201ENST00000443090 522 ntBASIC26.18■■□□□ 1.78
RIPK4P57078 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.18■■□□□ 1.78
RIPK4P57078 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RIPK4P57078 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
RIPK4P57078 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC26.18■■□□□ 1.78
RIPK4P57078 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RIPK4P57078 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
RIPK4P57078 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC26.17■■□□□ 1.78
RIPK4P57078 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RIPK4P57078 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIPK4P57078 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIPK4P57078 KRT16P6-202ENST00000425692 1426 ntBASIC26.17■■□□□ 1.78
RIPK4P57078 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIPK4P57078 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
RIPK4P57078 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
RIPK4P57078 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.17■■□□□ 1.78
RIPK4P57078 AC142381.4-202ENST00000563973 229 ntBASIC26.17■■□□□ 1.78
RIPK4P57078 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.17■■□□□ 1.78
RIPK4P57078 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
RIPK4P57078 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIPK4P57078 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC26.17■■□□□ 1.78
RIPK4P57078 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC26.17■■□□□ 1.78
RIPK4P57078 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIPK4P57078 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIPK4P57078 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RIPK4P57078 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC26.17■■□□□ 1.78
RIPK4P57078 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RIPK4P57078 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC26.16■■□□□ 1.78
RIPK4P57078 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC26.16■■□□□ 1.78
RIPK4P57078 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
RIPK4P57078 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RIPK4P57078 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RIPK4P57078 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.16■■□□□ 1.78
RIPK4P57078 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC26.16■■□□□ 1.78
RIPK4P57078 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RIPK4P57078 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
RIPK4P57078 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC26.16■■□□□ 1.78
RIPK4P57078 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.16■■□□□ 1.78
RIPK4P57078 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RIPK4P57078 C1QBPP2-201ENST00000528754 825 ntBASIC26.16■■□□□ 1.78
RIPK4P57078 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RIPK4P57078 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC26.16■■□□□ 1.78
RIPK4P57078 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RIPK4P57078 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC26.16■■□□□ 1.78
RIPK4P57078 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC26.16■■□□□ 1.78
RIPK4P57078 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC26.16■■□□□ 1.78
RIPK4P57078 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC26.15■■□□□ 1.78
RIPK4P57078 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC26.15■■□□□ 1.78
RIPK4P57078 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RIPK4P57078 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RIPK4P57078 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RIPK4P57078 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RIPK4P57078 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RIPK4P57078 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
RIPK4P57078 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RIPK4P57078 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC26.15■■□□□ 1.78
RIPK4P57078 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.15■■□□□ 1.78
RIPK4P57078 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
RIPK4P57078 RPPH1-201ENST00000516869 333 ntBASIC26.15■■□□□ 1.78
RIPK4P57078 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC26.15■■□□□ 1.78
RIPK4P57078 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RIPK4P57078 AL359736.2-201ENST00000621992 437 ntBASIC26.15■■□□□ 1.78
RIPK4P57078 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RIPK4P57078 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RIPK4P57078 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RIPK4P57078 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms