Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN6P56747 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN6P56747 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN6P56747 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN6P56747 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN6P56747 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN6P56747 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN6P56747 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN6P56747 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN6P56747 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN6P56747 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN6P56747 SLC25A3P1-201ENST00000443844 931 ntBASIC19.23■□□□□ 0.67
CLDN6P56747 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN6P56747 AC023632.3-201ENST00000521633 145 ntBASIC19.23■□□□□ 0.67
CLDN6P56747 AL121906.2-201ENST00000621597 723 ntBASIC19.23■□□□□ 0.67
CLDN6P56747 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN6P56747 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN6P56747 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN6P56747 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN6P56747 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN6P56747 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN6P56747 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN6P56747 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN6P56747 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN6P56747 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CLDN6P56747 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN6P56747 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN6P56747 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.22■□□□□ 0.67
CLDN6P56747 DUX4L26-201ENST00000489078 1255 ntBASIC19.22■□□□□ 0.67
CLDN6P56747 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.22■□□□□ 0.67
CLDN6P56747 AC010203.1-204ENST00000548782 407 ntBASIC19.22■□□□□ 0.67
CLDN6P56747 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.22■□□□□ 0.67
CLDN6P56747 AC004264.1-201ENST00000608354 794 ntBASIC19.22■□□□□ 0.67
CLDN6P56747 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN6P56747 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN6P56747 AC073508.3-201ENST00000619697 1419 ntBASIC19.22■□□□□ 0.67
CLDN6P56747 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN6P56747 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN6P56747 AC011484.1-201ENST00000377652 1995 ntBASIC19.22■□□□□ 0.67
CLDN6P56747 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN6P56747 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLDN6P56747 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN6P56747 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.22■□□□□ 0.67
CLDN6P56747 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLDN6P56747 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CLDN6P56747 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN6P56747 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN6P56747 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN6P56747 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN6P56747 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN6P56747 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLDN6P56747 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN6P56747 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN6P56747 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN6P56747 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN6P56747 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN6P56747 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN6P56747 FITM1-202ENST00000559294 800 ntBASIC19.21■□□□□ 0.67
CLDN6P56747 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN6P56747 WWOX-216ENST00000569818 525 ntBASIC19.21■□□□□ 0.67
CLDN6P56747 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.21■□□□□ 0.67
CLDN6P56747 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CLDN6P56747 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN6P56747 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN6P56747 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLDN6P56747 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN6P56747 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
CLDN6P56747 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN6P56747 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN6P56747 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN6P56747 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN6P56747 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN6P56747 KRT8P36-201ENST00000489121 1440 ntBASIC19.2■□□□□ 0.66
CLDN6P56747 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CLDN6P56747 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN6P56747 AC087388.1-201ENST00000571370 1112 ntBASIC19.2■□□□□ 0.66
CLDN6P56747 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN6P56747 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN6P56747 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN6P56747 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CLDN6P56747 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN6P56747 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN6P56747 KRT18P22-201ENST00000402024 1347 ntBASIC19.2■□□□□ 0.66
CLDN6P56747 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN6P56747 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CLDN6P56747 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CLDN6P56747 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN6P56747 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN6P56747 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN6P56747 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN6P56747 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLDN6P56747 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN6P56747 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms