Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLNS1AP54105 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLNS1AP54105 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.82■□□□□ 0.76
CLNS1AP54105 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLNS1AP54105 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.82■□□□□ 0.76
CLNS1AP54105 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLNS1AP54105 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLNS1AP54105 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.81■□□□□ 0.76
CLNS1AP54105 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLNS1AP54105 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLNS1AP54105 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLNS1AP54105 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLNS1AP54105 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLNS1AP54105 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLNS1AP54105 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLNS1AP54105 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.81■□□□□ 0.76
CLNS1AP54105 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLNS1AP54105 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLNS1AP54105 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLNS1AP54105 AC053503.5-201ENST00000601508 636 ntBASIC19.81■□□□□ 0.76
CLNS1AP54105 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CLNS1AP54105 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CLNS1AP54105 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLNS1AP54105 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLNS1AP54105 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLNS1AP54105 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.81■□□□□ 0.76
CLNS1AP54105 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.81■□□□□ 0.76
CLNS1AP54105 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLNS1AP54105 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.8■□□□□ 0.76
CLNS1AP54105 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLNS1AP54105 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.8■□□□□ 0.76
CLNS1AP54105 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.8■□□□□ 0.76
CLNS1AP54105 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLNS1AP54105 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLNS1AP54105 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.8■□□□□ 0.76
CLNS1AP54105 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLNS1AP54105 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLNS1AP54105 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLNS1AP54105 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.8■□□□□ 0.76
CLNS1AP54105 EEF1DP3-203ENST00000566025 782 ntBASIC19.8■□□□□ 0.76
CLNS1AP54105 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.8■□□□□ 0.76
CLNS1AP54105 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.8■□□□□ 0.76
CLNS1AP54105 AL355001.2-201ENST00000620617 1191 ntBASIC19.8■□□□□ 0.76
CLNS1AP54105 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.8■□□□□ 0.76
CLNS1AP54105 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLNS1AP54105 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLNS1AP54105 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.8■□□□□ 0.76
CLNS1AP54105 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CLNS1AP54105 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLNS1AP54105 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLNS1AP54105 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.79■□□□□ 0.76
CLNS1AP54105 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLNS1AP54105 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLNS1AP54105 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 AC007225.1-201ENST00000566331 1836 ntBASIC19.79■□□□□ 0.76
CLNS1AP54105 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.79■□□□□ 0.76
CLNS1AP54105 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.79■□□□□ 0.76
CLNS1AP54105 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.79■□□□□ 0.76
CLNS1AP54105 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
CLNS1AP54105 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 AC027702.1-201ENST00000563810 1770 ntBASIC19.79■□□□□ 0.76
CLNS1AP54105 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.79■□□□□ 0.76
CLNS1AP54105 AC106820.2-201ENST00000563775 3264 ntBASIC19.79■□□□□ 0.76
CLNS1AP54105 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.79■□□□□ 0.76
CLNS1AP54105 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLNS1AP54105 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLNS1AP54105 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.79■□□□□ 0.76
CLNS1AP54105 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLNS1AP54105 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLNS1AP54105 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLNS1AP54105 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLNS1AP54105 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLNS1AP54105 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLNS1AP54105 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLNS1AP54105 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.78■□□□□ 0.76
CLNS1AP54105 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLNS1AP54105 MIR939-201ENST00000401314 82 ntBASIC19.78■□□□□ 0.76
CLNS1AP54105 AC091305.1-201ENST00000479476 895 ntBASIC19.78■□□□□ 0.76
CLNS1AP54105 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLNS1AP54105 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CLNS1AP54105 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLNS1AP54105 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLNS1AP54105 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLNS1AP54105 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLNS1AP54105 AP004607.4-201ENST00000530158 1459 ntBASIC19.78■□□□□ 0.76
CLNS1AP54105 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLNS1AP54105 AL133373.2-201ENST00000623187 2828 ntBASIC19.78■□□□□ 0.76
CLNS1AP54105 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLNS1AP54105 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms