Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC005363.2-201ENST00000618631 242 ntBASIC22.24■■□□□ 1.15
CPT1AP50416 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPT1AP50416 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPT1AP50416 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPT1AP50416 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.24■■□□□ 1.15
CPT1AP50416 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CPT1AP50416 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.24■■□□□ 1.15
CPT1AP50416 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPT1AP50416 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CPT1AP50416 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CPT1AP50416 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CPT1AP50416 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CPT1AP50416 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.23■■□□□ 1.15
CPT1AP50416 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.23■■□□□ 1.15
CPT1AP50416 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CPT1AP50416 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CPT1AP50416 AC092865.7-201ENST00000641832 219 ntBASIC22.23■■□□□ 1.15
CPT1AP50416 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
CPT1AP50416 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CPT1AP50416 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CPT1AP50416 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CPT1AP50416 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.23■■□□□ 1.15
CPT1AP50416 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.22■■□□□ 1.15
CPT1AP50416 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPT1AP50416 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.22■■□□□ 1.15
CPT1AP50416 AP006587.1-201ENST00000534129 1502 ntBASIC22.22■■□□□ 1.15
CPT1AP50416 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CPT1AP50416 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.22■■□□□ 1.15
CPT1AP50416 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPT1AP50416 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.22■■□□□ 1.15
CPT1AP50416 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.22■■□□□ 1.15
CPT1AP50416 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPT1AP50416 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPT1AP50416 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPT1AP50416 KRT8P9-201ENST00000558927 1449 ntBASIC22.22■■□□□ 1.15
CPT1AP50416 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPT1AP50416 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPT1AP50416 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.21■■□□□ 1.15
CPT1AP50416 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.21■■□□□ 1.15
CPT1AP50416 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.21■■□□□ 1.15
CPT1AP50416 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPT1AP50416 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.21■■□□□ 1.15
CPT1AP50416 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.21■■□□□ 1.15
CPT1AP50416 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPT1AP50416 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CPT1AP50416 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPT1AP50416 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.21■■□□□ 1.15
CPT1AP50416 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPT1AP50416 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPT1AP50416 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CPT1AP50416 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.21■■□□□ 1.15
CPT1AP50416 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPT1AP50416 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.21■■□□□ 1.15
CPT1AP50416 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPT1AP50416 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
CPT1AP50416 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CPT1AP50416 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
CPT1AP50416 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPT1AP50416 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.2■■□□□ 1.14
CPT1AP50416 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPT1AP50416 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.2■■□□□ 1.14
CPT1AP50416 FITM1-202ENST00000559294 800 ntBASIC22.2■■□□□ 1.14
CPT1AP50416 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.2■■□□□ 1.14
CPT1AP50416 NAPSB-206ENST00000562112 1266 ntBASIC22.2■■□□□ 1.14
CPT1AP50416 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.2■■□□□ 1.14
CPT1AP50416 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CPT1AP50416 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.2■■□□□ 1.14
CPT1AP50416 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.2■■□□□ 1.14
CPT1AP50416 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CPT1AP50416 LINC01568-207ENST00000641790 1380 ntBASIC22.2■■□□□ 1.14
CPT1AP50416 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPT1AP50416 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPT1AP50416 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.2■■□□□ 1.14
CPT1AP50416 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CPT1AP50416 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPT1AP50416 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.19■■□□□ 1.14
CPT1AP50416 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPT1AP50416 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CPT1AP50416 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CPT1AP50416 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPT1AP50416 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPT1AP50416 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.19■■□□□ 1.14
CPT1AP50416 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.19■■□□□ 1.14
CPT1AP50416 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CPT1AP50416 AL031985.4-201ENST00000642138 673 ntBASIC22.19■■□□□ 1.14
CPT1AP50416 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPT1AP50416 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CPT1AP50416 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPT1AP50416 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CPT1AP50416 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CPT1AP50416 AC005229.4-201ENST00000610085 2198 ntBASIC22.19■■□□□ 1.14
CPT1AP50416 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.18■■□□□ 1.14
CPT1AP50416 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
CPT1AP50416 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.18■■□□□ 1.14
CPT1AP50416 FP700111.2-201ENST00000619190 1892 ntBASIC22.18■■□□□ 1.14
CPT1AP50416 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CPT1AP50416 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CPT1AP50416 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CPT1AP50416 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.18■■□□□ 1.14
CPT1AP50416 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms